Streptomyces tubercidicus: STRTU_004782
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Entry
STRTU_004782 CDS
T09099
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud03030
DNA replication
stud03430
Mismatch repair
stud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STRTU_004782 (holA)
03430 Mismatch repair
STRTU_004782 (holA)
03440 Homologous recombination
STRTU_004782 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stud03032
]
STRTU_004782 (holA)
03400 DNA repair and recombination proteins [BR:
stud03400
]
STRTU_004782 (holA)
Enzymes [BR:
stud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STRTU_004782 (holA)
DNA replication proteins [BR:
stud03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STRTU_004782 (holA)
DNA repair and recombination proteins [BR:
stud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STRTU_004782 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WAU14190
LinkDB
All DBs
Position
5510887..5511870
Genome browser
AA seq
327 aa
AA seq
DB search
MARKTAHDDPLAPVTIAVGQEDLLLDRAVQQVVAAARAADADTDVRDLTPDQLQPGTLAE
LTSPSLFAERKVVVVRAAQDLSADTIKDVKAYLGSPAEEITLVLLHAGGAKGKGLLDAAR
KAGAREVACPKMTKPADRLAFVRGEFRATGRSATPEACQSLVDAIGSDLRELASACAQLA
ADVEGTIDEAVVARYYTGRAEASSFTVADRAVEGRAAEALEALRWAIATGVAPVMITSAL
AQGVRAIGKLASAPRGARPGDLARDLGMPPWKIDRVRQQMRGWSADGVATALRAVAAADA
GVKGGGDDPEYALEKAVVTIARAARSR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaagacagctcacgatgacccgctcgcccccgtcacgatcgcggtgggccag
gaagacctgctgttggaccgcgcggtgcagcaggtggtggcggccgcccgcgcggccgat
gcggacaccgatgtgcgcgacctcacccccgatcagctgcagcccggcactctcgccgag
ctgaccagcccctcgctcttcgccgagcgcaaggtcgtcgtggtgcgggccgcccaggac
ctgtcggcggacaccatcaaggacgtcaaggcgtatctgggctcgcctgccgaggagatc
acgctggtgctgctgcacgccggtggcgccaaggggaagggcctgctggacgcggcccgt
aaggccggggcgcgggaagtggcctgccccaagatgaccaagccggccgaccggctggcc
ttcgtacggggcgagttccgtgcgacggggcgttcggcgacgcctgaggcatgccagtcg
ctggtggacgcgatcggcagcgatctgcgtgagttggcatcggcgtgtgcgcagttggcc
gccgatgtcgagggcacgatcgacgaggccgtcgtggcgcgctattacacgggccgggcg
gaggcatcgagcttcaccgtcgccgaccgtgccgtcgagggccgggccgccgaggcgctg
gaggccctgcgctgggcgatcgccaccggcgtcgcccccgtcatgatcaccagcgcgctg
gcccaaggcgtccgcgccatcggcaagctggcctccgccccgcgcggcgcccgccccggc
gacctggcccgcgacctgggcatgccgccgtggaagatcgaccgggtacggcagcagatg
cgcggctggtcggcggacggcgtggccacggcgctgcgcgcggtggcggcggccgatgcg
ggggtgaagggcggcggcgacgatcccgagtacgccctggagaaagccgtcgtgacgatc
gcacgggcggcccggtcgcgctga
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integrated database retrieval system
