Streptomyces tubercidicus: STRTU_005101
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Entry
STRTU_005101 CDS
T09099
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud00521
Streptomycin biosynthesis
stud00523
Polyketide sugar unit biosynthesis
stud00525
Acarbose and validamycin biosynthesis
stud00541
Biosynthesis of various nucleotide sugars
stud01055
Biosynthesis of vancomycin group antibiotics
stud01100
Metabolic pathways
stud01110
Biosynthesis of secondary metabolites
stud01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
STRTU_005101 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
STRTU_005101 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
STRTU_005101 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
STRTU_005101 (rfbB)
00525 Acarbose and validamycin biosynthesis
STRTU_005101 (rfbB)
Enzymes [BR:
stud01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
STRTU_005101 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
WAU14480
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Position
5858622..5859623
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AA seq
333 aa
AA seq
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MKILVTGGAGFIGSHYVRALLAGSYGADAGTRITVLDRLTYAGNRDSLPAAHDRLEFVRG
DICDGALLRELLPGHDAIVHFAAESHVDRSVDGGAEFVRTNALGTQSVLEAALHSGVERV
LHVSTDEVYGSIDEGAWTEAWPLLPNSPYAASKAGSDLIARSYWRTHGLNVSITRCSNNY
GPYQHPEKLIPRFVTNLLEGLTVPVYGDGRNRREWLHVDDHCRALHLVLTQGGAGEVYNV
GSGNELDNLSLTRRILELSGQDESMIRYVADRKGHDLRYALDDTKIREQLGYTPRIPFDE
GIAETVAWYRDNPEWWKPVKHRAAEAVEPAGAV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctggtgaccggaggagccggcttcatcggctcccactatgtacgcgccctg
ctggccggctcctacggcgctgacgcggggacccgaatcaccgtgctcgacaggctgacg
tacgccggcaaccgggacagcctgcccgctgcgcacgaccggctggaattcgtacgcggc
gacatctgcgacggtgcgctgttgcgcgaattgcttcccggccacgacgcgatcgtgcat
ttcgccgccgaatcacacgttgaccgctccgtggacggcggcgccgagttcgtccgcacc
aacgcgctgggcacccagagcgtgctggaggccgccctgcacagtggcgtcgagcgtgtc
ctgcacgtgtccaccgacgaggtgtacggctccatcgacgagggcgcctggacggaggcc
tggccgctgctgccgaattctccgtacgccgcctccaaggcgggctccgacctcatcgcg
cgctcttactggcgcacacatgggctgaacgtctccatcacgcgctgctccaacaattac
ggcccgtaccagcaccccgagaagctcatcccgaggtttgtcaccaatctgctggaaggc
ctcacggttccggtgtacggcgacggccgcaaccggcgcgagtggctgcacgtggacgac
cactgccgggccctccacctggtgctgacccaaggcggtgccggcgaggtgtacaacgtc
ggcagcggcaacgagctggacaatctttccctgacccgacggattctcgaactgtccggc
caggacgaatcgatgatccgctatgtcgccgaccgcaagggccacgacctgcgctacgcc
ctggacgacaccaagatccgtgagcaactcggctacacgccgcgcatccctttcgacgaa
ggcatcgcggagaccgtcgcttggtaccgcgacaaccccgagtggtggaagcccgtcaag
caccgtgccgcagaggccgtagaacccgccggggccgtctga
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