Streptomyces tubercidicus: STRTU_005156
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Entry
STRTU_005156 CDS
T09099
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
stud
Streptomyces tubercidicus
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stud03000
]
STRTU_005156
Transcription factors [BR:
stud03000
]
Prokaryotic type
Helix-turn-helix
LacI family
STRTU_005156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
HTH_IclR
HTH_26
HTH_Tnp_ISL3
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
WAU14532
LinkDB
All DBs
Position
complement(5921090..5922142)
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AA seq
350 aa
AA seq
DB search
MTARLSDIAAQAGVSEATVSRVLNGKPGVSATTRQSVLAALDVLGYERPVRLRQRSAGLV
GLITPELENPIFPAFAQVIGQALTRQGYTPVLATQTPGGSTEDELTEMLVDRGVAGIIFV
SGLHADTSADMQRYEQLRGQGVPFVLINGFSDKVQAPFVSPDDRAAVDLAVTHLGALGHR
RIGLALGPKRFVPVQRKIEGFVRAMQERLQTTPAEAEPFIQHSLYTLEGGQAAASALIER
GATAIVCASDMMALGAIRAARQRGLDVPHDLSVVGFDDSPLIAFTDPPLTTIRQPVTAMG
QAAVRALLEEVGGTPAPHSEFVFHPELVVRGSTASAPRTTARIPKPLRAH
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccggctctccgatatcgcagcacaggcgggtgtcagcgaggccaccgtcagc
cgggttctcaacgggaagcccggtgtctccgccaccacccgccagtccgtgctcgccgcc
ctcgatgtgctgggctacgagcgcccggtgcggctgcggcagcgcagcgccgggctggtc
gggctgatcaccccggagctggagaacccgatcttcccggccttcgcccaggtcatcggg
caggcgctgacccgccagggctatacgcccgtcctggcgacccagacccccggcggctcc
acggaggacgagctgaccgagatgctggtggaccgcggggtggccggcatcatcttcgtc
tccgggctgcacgcggacacctccgccgatatgcagcgctatgagcagctgcgcggccag
ggcgtcccgttcgtcctcatcaacggcttctccgacaaggtccaggcgcccttcgtctcc
cccgacgaccgcgccgcggtggacctggcggtcacccacctcggcgcgctcggccaccgg
cggatcgggctggccctcggccccaagcgcttcgtgcccgtacagcgcaagatcgagggc
ttcgtccgcgccatgcaggagcggctgcagaccaccccggccgaggcggagccgttcatc
cagcactccctctacacactggagggcggccaggccgcggcgagcgcgctgatcgagcgg
ggcgccacggccatcgtctgcgccagcgacatgatggcgctcggcgcgatccgcgcggcc
cgccagcgcgggctcgatgtcccccacgacctctccgtggtcggcttcgacgactccccc
ctcatcgccttcaccgacccgccgctgaccacgatccggcagccggtcacggccatggga
caggcggcggtacgggccctcctggaagaggtcggcggaaccccggctccccacagcgag
ttcgtcttccaccccgagctggtggtacgcggctcgaccgcctccgcgccgcgcacaacg
gctcgtattcccaagccgctgcgcgcgcactga
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