Streptomyces tubercidicus: STRTU_005316
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Entry
STRTU_005316 CDS
T09099
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud00470
D-Amino acid metabolism
stud00550
Peptidoglycan biosynthesis
stud01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
STRTU_005316 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
STRTU_005316 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
stud01011
]
STRTU_005316 (murD)
Enzymes [BR:
stud01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
STRTU_005316 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
stud01011
]
Precursor biosynthesis
Amino acid ligase
STRTU_005316 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox
AlaDh_PNT_C
Pyr_redox_2
CbiA
TrkA_N
2-Hacid_dh_C
AAA_31
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
WAU14685
LinkDB
All DBs
Position
6099730..6101184
Genome browser
AA seq
484 aa
AA seq
DB search
MTTQGPADFAGQHLTVAGLGVSGISAARALAGLGAHVTVVDGGDGDKQRAAARELTAEGI
TVRLGDGDTLPEGTELVVTSPGWKPDSPLFAAAAAAGVDVVGDVEIAWRLRGPGAAAWLG
ITGTNGKTTTVRMLASILAAEGLRTLAVGNIGTPIIDVVLGQGKDGEPPYDVLAVELSSY
QLHWAPSVRAHSAAVLNLAPDHLDWHGSMEAYAADKGRIYEGNTVACVYNAADKATEDLV
READVEEGCRAIGFTLGTPGPSQLGVVDGILVDRAFVENRQKQAQELAEVSDIAPGSGTP
APHNIANALAAAALARAFGVRPAAVRDGLRAFHPDAHRIQIVAERDGVTYIDDSKATNTH
AAEASLAAYEHIVWIAGGLAKGATFDELVQKSAARLRGAVLIGADRALIREALARHAPDV
PVVDLDRTDTGAMSEAVREAARLAEPGDTVLLAPACASMDMFVNYNKRGDAFAEAVGDLT
ARDH
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacccagggcccggcggacttcgccggtcagcacctcaccgtcgccggcctgggc
gtgagcggcatcagtgccgcccgcgcgctggccggcctcggcgcccatgtcaccgtcgtg
gacggcggcgacggcgacaagcagcgcgccgcggcgcgggaactgacggcggaggggatc
accgtccgcctcggcgacggcgacaccctccccgaggggacagagctcgtcgtcacctcg
cccggctggaagccggacagcccgctgttcgcggcggccgcggcggcgggcgtcgatgtc
gtcggcgatgtggagatcgcctggcggctgcgcggacccggcgccgcggcctggctcggg
atcaccggcaccaacggcaagaccaccaccgtgcggatgctggcctcgatcctggccgcc
gagggactgcgcaccctggccgtcggcaacatcggcaccccgatcatcgatgtcgtcctg
gggcagggcaaggacggcgagcccccctacgacgtgctcgccgtcgagctctccagctac
cagctgcactgggcgccctccgtacgggcgcactccgcggccgtcctcaacctcgccccc
gaccacctcgactggcacggctccatggaggcgtacgccgccgacaagggccggatctac
gagggcaacaccgtcgcctgcgtctacaacgcggccgacaaggccaccgaggacctggtg
cgcgaggcggacgtcgaggagggctgccgcgccatcggcttcaccctcggcacccccggc
ccctcccaactcggcgtcgtcgacggcatcctcgtcgaccgcgccttcgtggagaaccgg
cagaagcaggcccaggagctcgccgaggtctccgatatcgcccccggctccgggaccccc
gccccgcacaacatcgccaacgccctcgcggcggcggcgctggcccgtgccttcggcgtc
cgcccggcagccgtacgcgacggactgcgcgccttccacccggacgcgcaccgcatccag
atcgtcgcggagcgcgacggcgtcacctatatcgacgactccaaggccaccaacacccac
gccgccgaggcgtcgttggcggcctacgagcacatcgtgtggatcgccggcggcctcgcc
aagggcgcgaccttcgacgagctggtgcagaagtcggcggcccggctccgcggggcggtg
ctgatcggcgccgatcgggcgctgatccgggaagccctggcgcgacacgcccccgatgtg
ccggtggtcgacctcgaccggaccgacactggggcgatgtccgaggcggtccgggaagcg
gcccggctggccgagcccggcgacaccgtcctgctggccccggcctgtgcctcgatggac
atgttcgtcaattacaacaagcggggcgatgccttcgccgaagcggtcggtgacctgacc
gcacgggatcactag
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