Streptomyces tubercidicus: STRTU_005707
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Entry
STRTU_005707 CDS
T09099
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud00061
Fatty acid biosynthesis
stud00071
Fatty acid degradation
stud01100
Metabolic pathways
stud01212
Fatty acid metabolism
stud02024
Quorum sensing
stud04146
Peroxisome
Module
stud_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
STRTU_005707
00071 Fatty acid degradation
STRTU_005707
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
STRTU_005707
09145 Cellular community - prokaryotes
02024 Quorum sensing
STRTU_005707
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
stud01004
]
STRTU_005707
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stud04147
]
STRTU_005707
Enzymes [BR:
stud01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
STRTU_005707
Lipid biosynthesis proteins [BR:
stud01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
STRTU_005707
Exosome [BR:
stud04147
]
Exosomal proteins
Exosomal proteins of breast milk
STRTU_005707
Exosomal proteins of breast cancer cells
STRTU_005707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WAU15037
LinkDB
All DBs
Position
6540258..6541919
Genome browser
AA seq
553 aa
AA seq
DB search
MTSYQDKPWLAQLTDAQRAPVQPPPSTLHAFRAAVRRAPGRTALAYFDGRLSYAETDALS
DGIADRLAGRGFRRGDRAAVMLQNTPHFVLAVLGVWKAGGVVVPVNPMYKSAEMRHILDD
AEVTAVICADRTWDGFLRVTAAEAPSVRIVLTAHERDLQTRDDRRVLHGERVGPLHGAED
LLTVARTPGRIRVAPADPGLTADDLALISYTSGTSGTPKGATNTHGNITYNAERQRIGLA
LPDGATYFALAPLFHITGMVCQLAACIANQGTLVLAYRFEAGVVLDAFLEHRPAYTVGPS
TAYMALMAHPEVTRDHFASFRTMSSGGAPLPPALVEKFRTGFGPYVHNGYGLTECTAPCA
SVPPGREAPVDKVSGTLAVGVPGPDTVVRIIGEDGRDLPFGEPGEIAVRGPQVVPGYWRR
PDATAEGFPDGELRTGDIGFMDRDGWLYVVDRKKDMINASGFKVWPREVEDVLYGHPAVR
EAAVVGVPDAYRGESVKAYVSLRPGASAEPAELAAYCKERLAAYKYPRAVEILAELPKTT
SGKILRRELRHRA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgacctcctaccaggacaagccgtggctggcacagctcaccgacgcccagcgcgccccc
gtccagccgccgccttcgacgctgcacgccttccgggccgcggtgcgccgggcccccggc
cgtacggccctcgcctacttcgacggccggctgtcctacgccgagaccgatgcgctctcc
gacggcatcgccgaccgtctcgccggccgcggcttccggcgcggcgaccgggccgcggtc
atgctgcagaacaccccgcacttcgtgctcgccgtgctcggcgtgtggaaggcgggcggg
gtggtggtgcccgtcaaccccatgtacaagtccgccgagatgcggcacatcctggacgac
gccgaggtcaccgccgtgatctgcgccgaccgcacctgggacggctttctgcgggtcacc
gccgccgaggcgccgtccgtacggatcgtgctcaccgcccatgaacgggatctgcagacc
cgcgacgaccggcgggtgctgcacggtgagcgggtcgggccgctgcacggtgccgaggat
ttgctgaccgtggcgcgcacccccggccggatacgggtggctcccgccgaccccggactc
accgccgacgacctcgcgctgatcagctacacctccggcaccagcgggacccccaagggc
gccaccaacacccacggcaacatcacctataacgccgaacgccagcgcatcggtctggcc
ctccccgacggcgccacctacttcgcgctcgcccccctcttccacatcaccggcatggtc
tgccaactggcggcctgtatcgccaaccagggcaccctggtgctggcctaccgcttcgag
gcgggcgtcgtcctggacgccttcctggagcaccgccccgcctatacggtcggcccttcg
accgcctatatggcgctgatggcgcaccccgaggtcacccgcgaccacttcgcgtccttc
cggaccatgtcctccggcggtgcgccgctgccgcccgccctcgtcgagaagttccgtacc
ggtttcgggccgtatgtccacaacggttacgggctgaccgagtgcaccgcgccctgtgcc
agcgtcccgccgggcagggaggcgccggtcgacaaggtctccggcacgctcgccgtcggt
gtgcccggacccgacaccgtggtccggatcatcggtgaggacggccgggacctgccgttc
ggtgagccgggcgagatcgcggtgcgcggcccccaggtcgtccccggctactggcgccgc
cccgacgccaccgccgagggcttcccggacggtgagctgcggaccggcgatatcggcttc
atggaccgcgacggctggctctatgtcgtcgaccgcaagaaggacatgatcaacgcgtcc
ggtttcaaggtgtggccccgcgaggtcgaggacgtgctctacggccaccccgcggtgcgc
gaggcggcggtggtcggggtgcccgacgcctaccgcggcgagtcggtgaaggcgtatgtc
agcctgcggcccggcgcctccgcggaacccgccgagctggccgcctactgcaaggaacgg
ctggcggcgtacaaatatccccgcgcggtggagatcctggccgagcttccgaagaccacg
agtggcaagatcctccgacgggagctgcgccaccgcgcatga
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