Streptomyces tubercidicus: STRTU_005799
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Entry
STRTU_005799 CDS
T09099
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
stud
Streptomyces tubercidicus
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stud03019
]
STRTU_005799
Enzymes [BR:
stud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
STRTU_005799
Messenger RNA biogenesis [BR:
stud03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
STRTU_005799
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
AAA_30
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WAU15122
LinkDB
All DBs
Position
6642179..6644995
Genome browser
AA seq
938 aa
AA seq
DB search
MTEDMSPAERYAAAKLRAAEQATALAPFREMYDFGLDPFQVEACRALEAGQGVLVAAPTG
SGKTIVGEFAVHLALEQGRKCFYTTPIKALSNQKYQDLVKRYGAEKVGLLTGDNSVNSEA
PVVVMTTEVLRNMLYSGSQSLVGLGYVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSL
SATVSNAEEFGDWLDTVRGDTAVIVSEHRPVPLWQHVLAGRRIYDLFEERDGQRGGRREV
NPDLERLARMENSRPTFGRDKRRGRNMREADRERERRQRARIWTPSRPEVIDRLDNEGLL
PAITFIFSRAGCEAAVQQCLVSGLRLNDQEGREQVRRIVEARTAGIPDDDLHVLGYFEWL
EGLERGIAAHHAGMLPTFKEVVEELFVKGLVKAVFATETLALGINMPARSVVLEKLVKWN
GEQHADITPGEYTQLTGRAGRRGIDIEGHAVVLWQRGMDPGALAGLAGTRTYPLRSSFKP
SYNMAVNLVSQFGRHRSRELLEMSFAQFQADKSVVGISRQVQKNEEGLEGYRGSMTCHLG
DFEEYSALRRQLKDRETELAKQGAAQRRVAAAAALEKLKPGDVIHVPTGKYAGLALVLDP
GMPSGRTNGHRGFDAQDGPRPLVLTAERQVKRLASIDFPVPVKALDRMRIPKSFNARSPQ
SRRDLASALRTKAGHMVPSRHRKPRAEAADDREIARLRTEIRAHPCHGCAEREDHARWAE
RYHRLLRDTRQLERRIEGRTNTIARTFDRICGLLTEMDYLEGDTVTDEGRRLARLYGELD
LLASECLREGVWEGLGPAELAACASALVYEARQADDAVAPKLPAGKAKDALGEMVRIWGR
LDALEEDHKINQAEGVGQREPDLGFAWAAYRWASGFGLDEVLREAEMPAGDFVRWCKQLI
DVLGQIAAAAPPGGTVARTARKAMDGVLRGVVAYSSVG
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggacatgtcccctgctgagcgctatgccgccgccaagctcagggcggccgag
caggccaccgcactcgcccctttccgtgaaatgtacgacttcgggctggatccgttccag
gtcgaggcgtgtcgggccctggaggccggccagggcgtgctggtcgcggcccccactgga
tccggcaagacgatcgtcggcgaattcgccgtccacctggccctggagcagggccgaaaa
tgcttctacaccacgcccatcaaggcgctctccaaccagaagtaccaggatctggtcaag
cgttacggcgccgagaaggtcggtctgctgaccggcgacaacagcgtcaactccgaggct
ccggtggtcgtgatgaccaccgaggtgctgcggaacatgctttattccggctcgcagtcg
ctggtcggcctcggctatgtggtcatggacgaggtgcactatctctccgaccgcttccgt
ggcgccgtctgggaagaggtgatcatccatcttcccgagtcggtgacgctggtgtcactg
tcggcgacggtctccaacgccgaggagttcggcgactggctggacacggtgcgcggtgac
accgccgtgatcgtctccgagcaccggccggtgccgctgtggcagcacgtgctcgcgggg
cggcggatatacgacctgttcgaggagcgggacgggcagcgcggcggccgccgtgaggtc
aaccccgatctggagcggctggcgcggatggagaacagccggccgacgttcggccgggac
aagcgccggggccgcaatatgcgcgaggcggaccgggagcgggagcgccggcagcgcgcc
cgtatctggacgccgagccggcccgaggtcatcgaccgcctcgacaacgagggcctgttg
cccgcgatcaccttcatcttcagccgggccggctgcgaggcggccgtccagcagtgcctg
gtttcggggctgcggctcaatgaccaggagggccgtgagcaggtccgtcgcatagtggag
gcgcggacggccgggattccggatgacgaccttcatgtgctgggctacttcgagtggctg
gagggcctggagcggggcatcgccgcgcaccatgccgggatgctgccgaccttcaaggag
gtcgtcgaggagctgttcgtgaagggcctggtcaaggccgtcttcgccaccgagaccctg
gcgctgggcatcaacatgcccgcgcggtccgtggtgttggaaaagctggtgaagtggaac
ggtgagcagcacgccgatatcacccccggcgagtacacccagctgaccggccgggccggg
cgccgcggtatcgacatcgagggccatgcggtggtgctgtggcagcgggggatggacccg
ggcgcgctggccgggctcgccgggacgcgtacgtatccgctgcggtcctccttcaagccg
tcgtacaacatggcggtcaacctcgtctcgcagttcggcaggcaccgttcgcgggagctg
ctggagatgtcgttcgcgcagttccaggccgataagtcggtggtcgggatctcgcggcag
gtgcagaagaacgaggaggggctggagggttaccgcggctcgatgacctgccacctcggt
gacttcgaggaatactccgcgctgcggcggcagttgaaggaccgtgagacggagctggcc
aagcagggtgcggcgcagcggcgggtggcggccgcggcggcgctggagaagctgaagccc
ggcgatgtcattcatgtgccgacgggcaagtacgcgggtctggcgctggtcctcgacccc
ggtatgccctcggggcggacgaacggccaccgcggcttcgatgcgcaggacgggccgcgg
ccgctggtgctgaccgccgagcggcaggtcaagcggctggcctcgatcgacttcccggtg
ccggtcaaggcgctggaccggatgcggattcccaagtcgttcaatgcccgtagcccgcag
tcgcgccgcgatctggcctccgcgctgcggacgaaggccggtcatatggtgccgtcgcgg
catcgtaagccccgcgcggaggcggccgacgaccgtgagatcgcccggctgcgtacggag
atccgggcgcacccctgccatggctgcgccgagcgtgaggaccacgcccgctgggccgag
cgctatcaccgactgctgcgtgacacccgtcagttggagcgccggatcgaggggcggacg
aacaccatcgcccgtaccttcgaccggatctgtggcctgctgaccgagatggactacctc
gaaggcgacaccgtcaccgacgaggggcgtcggctcgcccggctctacggtgagctggat
ctgctggcgagtgagtgtctgcgcgagggcgtctgggaggggctgggccccgctgagctg
gcggcctgtgcctcggcgctggtgtacgaggcgcggcaggcggatgacgcggtggcgccc
aagctgccggccggcaaggccaaggacgcactgggcgagatggtccgtatctggggccgg
ctggatgccctggaggaggatcacaagatcaaccaggcggagggcgtcggccagcgtgag
ccggacctcggcttcgcctgggccgcctaccgctgggcctccggcttcggtctcgacgag
gtgctccgcgaggccgagatgcccgccggtgacttcgtccgctggtgcaagcagctgatc
gacgtcctcggccagatcgcggccgcggccccgcccggcggcacggtcgcccgcacggcc
cgcaaggccatggatggtgtgctgcgtggtgtggtggcgtattcgtcggtgggctga
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integrated database retrieval system
