Streptomyces tubercidicus: STRTU_005965
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Entry
STRTU_005965 CDS
T09099
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
STRTU_005965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stud03400
]
STRTU_005965
Enzymes [BR:
stud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STRTU_005965
DNA repair and recombination proteins [BR:
stud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
STRTU_005965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
WAU15271
LinkDB
All DBs
Position
6813565..6815703
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AA seq
712 aa
AA seq
DB search
MSRENGRPDAGASDAGEQLALIREAVRETKTERAKPRTWRGAELAAELPVARVLVDKGLV
HLDRYFDYAVPAAMDQEAQPGVRVRVRFGAGEKGGRREGGKLVSGFIVERVAESDYRGVL
APVAQVLSSERVLTPELLALCRSVADRYAGTLADVVQLAVPPRRARAEAKPSPAPLPPNP
PPEPGSWERYGAGAGFLAALTRGDAPRAVWTALPGATWPQELARAAAAALAGGRGALVVV
PDGRAAARVDAALGELIGAGRHVLLTADAGPEERYRRWLAVSRGAVRAVVGTRAAMFAPV
ADLGLVALWDDGDASHSDPHAPQPHAREVLIQRSVHERAGFLLGGLSCTVEAAQLVETGW
ARPLTAEREVVRAAAPLVRTVGDGDEARDAAARAARLPTMAWQVVREGLQRGPVLIQVPR
RGYAPRLACERCRTPARCRACAGPLEARDAGELCCAWCGRPESDWHCSECGGARLRAQVV
GARRTAEELGRVFPAVPVRTSGRDHVLATVPGAPALVVSTPGAEPVAEGGGYAAALLLDG
WALLGRPDLRAGEEALRRWLGAAALVRGQVEGGTVAVIAEPTLRPVQALVRWDPVGHAVR
ELAERAELGFPPVSRMASVAGRGEDVTELLRSAELPVEAEVLGPVPLPVPDPGRPRRPGD
PPPGEQWERALVRVRPGQGAALAAALKAARAARLVKREGEAVRVRIDPPDLG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagggagaacgggcgaccggacgcgggggcgtcggatgcgggcgagcagttggcc
ctcatccgggaggccgtgcgggagaccaagacggagcgggcgaagccgcggacgtggcgg
ggggccgagctggccgccgagctgccggtggcgcgggtgctggtcgacaaggggctggtg
cacctcgaccggtatttcgactacgcggtgccggcggcgatggatcaggaggcgcagccc
ggggtgcgggtccgggtgcgcttcggtgcgggggagaagggcggccggcgcgagggcggc
aagctggtcagcgggttcatcgtggagcgggtcgcggagagcgactaccggggggtgctc
gccccggtcgcgcaggtgctgtcgtccgagcgggtgctgacgccggagctgctggcgctg
tgccgatcggtggcggaccgctatgccgggacgctcgccgatgtggtgcagctggccgtg
ccgccgcgccgggcgcgcgcggaggccaaaccgtcgcccgcgccgctgccacccaacccg
cccccggagccggggagttgggagcgttacggcgcgggcgccgggtttctggcggcgctc
acccggggggacgcgccgcgcgcggtgtggacggcgctgcccggggcgacctggccgcag
gagctcgcgcgggcggcggccgcggcgctggcgggcgggcgcggtgcgctggtggtggtg
ccggacgggcgggccgcggcgcgggtggacgcggcgctcggcgagctgatcggcgcgggc
cgccatgtgctgctgaccgccgacgccgggcccgaggagcgctatcgccgctggctggcg
gtcagccgtggcgcggtgcgggccgtggtcgggacccgggcggcgatgttcgcgccggtc
gccgacctgggcctggtggccctctgggacgacggggacgccagccacagcgatccccat
gcgccgcagccgcatgcccgtgaggtcctcatccagcggtcggtccatgagcgcgcgggc
tttctgctgggcggcctgagctgcacggtcgaggcggcccagctggtcgagacgggctgg
gcgcgcccgctgaccgccgagcgcgaggtggtgcgggccgcggcgcccctggtgcgtacg
gtcggcgacggcgacgaggcgcgcgacgccgccgcgcgggccgcccggctgccgacgatg
gcctggcaggtggtgcgggagggcctccagcgcggaccggtgctcatccaggtcccgcgc
cggggatacgcgccccggctggcgtgcgaacggtgccgtacccccgcgcgctgccgggcc
tgtgcgggcccgctggaggcgcgggacgccggtgagttgtgctgcgcgtggtgcggacgc
cccgagtcggactggcactgttccgagtgcggcggtgcccggctgcgggcccaggtggtg
ggggcacggcggacggcggaggagctgggccgggtgttcccggcggtgccggtgcggacc
tcggggcgggaccatgtgctggccacggtgcccggggcccccgcgctcgtggtgagcacc
ccgggtgcggagccggtggccgagggcggcgggtatgcggccgcgctgctgctggacggc
tgggcgctgctgggccggccggatctgcgggccggtgaggaggcgctgcgccgctggctg
ggcgccgccgcgctggtccgcggccaggtggagggcggcacggtcgcggtgatcgcggag
ccgacgctgcgcccggtgcaggcgctggtgcgctgggacccggtcggccatgcggtccgc
gagctggccgaacgggccgagctgggctttcctccggtgtcgcggatggcctcggtggcc
ggccgcggtgaggatgtcaccgagctgctgcgatccgccgaactccccgtggaagccgag
gtattggggcctgtgccgctgccggtgccggaccccgggcgcccgcgccggccgggcgat
ccgccgccgggcgagcagtgggagcgtgcgctggtccgggtccgccccggccagggcgcg
gccctcgccgccgcgctcaaggccgcccgcgcggcccggttggtcaagcgggagggggag
gccgtacgggtccggatcgatccgcccgatctggggtga
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