Streptomyces tubercidicus: STRTU_006214
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Entry
STRTU_006214 CDS
T09099
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
stud
Streptomyces tubercidicus
Pathway
stud03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
STRTU_006214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stud03400
]
STRTU_006214
DNA repair and recombination proteins [BR:
stud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
STRTU_006214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
WAU16784
LinkDB
All DBs
Position
complement(7092211..7093185)
Genome browser
AA seq
324 aa
AA seq
DB search
MRPTAKFSISFGLVTIPVAAYNATDTSASVSFVRIHTADGGRVRNQPVCSLEGVEITPDE
IGRGYKPGDGDTVVPLTDEDLDALPLPTAKTLTILAFVAGGDIDPLQMGKGYYLGIDSPA
AAKPYVLLREAMERHQRVGLGKIALHGRETLAMIRPMEGALVMQVLLWPHQIRPMDGVLP
ERQAEVARNEVSAAEALMDSFGKLSEDDLHDHYREALEEIVAAKLAHREPEFPAGEEQPA
GEVMDLMAALQDSVRAAKRSRGEDEEDGARSGRGAKKSAAKKTAAQKSTAKKSTAAKSAA
AKKTTAKKPAAAKKTAGRGGRRAG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccacggcgaagttctccatcagcttcggcctggtcacgatcccggtcgccgcg
tacaacgccacggacacctccgcgtcggtcagctttgtgcggatccatacggcggacggc
ggacgggtgcgcaatcagcccgtgtgctcgctggagggcgtcgagatcacccccgacgag
atcggccggggctacaagcccggggacggcgacacggtcgtcccgctgacggacgaggat
ctggacgcgctgccgctgccgaccgcgaagaccctgacgatcctggccttcgtcgccggc
ggcgacatcgacccgctacagatgggcaagggctactacctgggcatcgacagccccgcc
gcggccaagccctatgtgctgctgcgggaggcgatggagcggcatcagcgggtcgggctc
ggcaagatcgcgctgcacgggcgggagaccctcgccatgatccgcccgatggagggcgcg
ctggtcatgcaggtgctgctgtggccgcaccagatccgcccgatggacggggtgctgccc
gagcggcaggcggaggtcgcccgcaacgaggtgtccgccgccgaggccctgatggactcc
ttcggcaagctgtcggaggacgatctgcacgatcactaccgtgaggcgctcgaagagatc
gtcgcggcgaagctggcgcaccgcgaaccggagttcccggccggtgaggagcagcccgcc
ggggaggtgatggacctgatggcggccctccaggacagcgtccgggcggccaagaggtcc
cgcggtgaggacgaggaggacggggcccggtccggccgtggcgcgaagaagagcgcggcg
aagaagactgcggcgcagaagagtacggcgaagaagtccacggccgcgaagagcgccgct
gccaagaagaccaccgccaagaagcctgccgcggcgaagaagaccgcgggccggggtgga
cggcgggcgggctga
DBGET
integrated database retrieval system
