Streptomyces tubercidicus: STRTU_006229
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Entry
STRTU_006229 CDS
T09099
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud00300
Lysine biosynthesis
stud00470
D-Amino acid metabolism
stud01100
Metabolic pathways
stud01110
Biosynthesis of secondary metabolites
stud01120
Microbial metabolism in diverse environments
stud01230
Biosynthesis of amino acids
Module
stud_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STRTU_006229
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
STRTU_006229
Enzymes [BR:
stud01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
STRTU_006229
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WAU15502
LinkDB
All DBs
Position
complement(7113009..7114271)
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AA seq
420 aa
AA seq
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MTTPGLAPTPAVRDRAQGLAPEELPAYLYDLTALRTHTAEVRAALPERVELYYAAKANPE
PEILGALRPYVDGYEVSSGGELAHVAKAVPGAPLAFGGPGKTPAEIAQALETGVERFHVE
SVYEIHMLASLAARLAPERRIAVLARFNLPVDDGSLDGSSLAMGGRPAPFGLDPEQAGEV
VALLTDGSYPHLELRGVHAHLASGLEAPEQLAVAESIVTWAAALAARHRVPLSEVTIGGG
MAVDYAAPERRFDWTAYGAGLDRLAAAHPGLTLRIEPGRALTAYCGWYATEVLDVKHSHG
EEFAVVRGGTHHLRTPATKGHDQPCTVLPSDAPWPHPWPRSAAEGGLVTVTGQLCTPKDV
LARQVPAPGLRAGDRVVFGVAGAYAWNISHHDFLMHPRPGFHFLGAEEPGAQEPGAAEGA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccccggcctcgcccccacccccgcggtccgcgaccgcgcccagggcctcgcg
cccgaggaactgcccgcctacctctacgacctgacggcgctgcgcacgcacacggccgag
gtccgggccgccctgcccgagcgcgtcgagctgtactacgcggccaaggccaacccggag
ccggagatcctgggcgcgctgcgcccgtacgtcgacggctacgaggtctcctcgggcggc
gaactggcgcatgtcgccaaggccgtacccggcgccccgctcgccttcggcggaccgggc
aagacgcccgcggagatcgcccaggcgctggagaccggcgtggagcgcttccacgtggag
agcgtgtacgagatccatatgctcgcgagcctggccgcgcggctcgccccggaacgccgg
atcgcggtgctggcccgcttcaacctgccggtcgacgacggctccctggacggcagttcg
ctggccatgggcggccgcccggcccccttcggactggaccccgagcaggccggtgaggtc
gtcgcgctgctcaccgacggcagctatccgcacctcgaactccgcggcgttcacgcccac
ttggcgagcggcctggaggcgccggagcagctggccgtggcggagtcgatcgtgacctgg
gccgccgcgctggccgcccggcaccgggtgccgctgtccgaggtgaccatcggcggcggc
atggcggtcgactacgccgcgccggagcgccgtttcgactggaccgcgtacggcgccggc
ctggaccggctcgccgcggcgcaccccggtctcaccctgcggatcgagccggggcgggcg
ctgaccgcgtactgcggctggtacgccaccgaggtgctggatgtgaagcacagccacggc
gaggagttcgcggtggtgcgcgggggcacccaccatctgcggaccccggcgaccaagggc
cacgaccagccctgcacggtgctgccgtccgacgcgccctggccgcacccctggccgcgg
tcggcggcggagggcggcctggtcaccgtcaccgggcagctgtgcaccccgaaggacgtg
ctggcccgccaggtcccggcgccggggctgcgggccggtgaccgggtggtgttcggggtc
gccggggcgtacgcctggaacatctcgcaccatgacttcctgatgcatccgcgccccggc
ttccacttcctgggcgccgaggagcccggtgcccaggagcccggcgcggcagagggggcc
tga
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