Streptomyces tubercidicus: STRTU_006680
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Entry
STRTU_006680 CDS
T09099
Name
(GenBank) response regulator transcription factor
KO
K24912
LuxR family transcriptional regulator, transcriptional activator for aerial hyphae formation
Organism
stud
Streptomyces tubercidicus
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stud03000
]
STRTU_006680
Transcription factors [BR:
stud03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
STRTU_006680
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
HTH_11
HTH_23
Sigma70_r4
HTH_28
Response_reg
HTH_24
HTH_Tnp_ISL3
HTH_IclR
HTH_29
HTH_68
HTH_5
HTH_AsnC-type
HTH_20
MarR_2
HTH_40
HTH_30
DUF742
DUF6115
HTH_38
HTH_Tnp_1
MarR
Phage_NinH
HrcA_DNA-bdg
Motif
Other DBs
NCBI-ProteinID:
WAU15926
LinkDB
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Position
complement(7629119..7629706)
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AA seq
195 aa
AA seq
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MIRVLVVHETRLLRSALTALLRDEEGIDAVAACWRSAPGRARSFRPQVCVVDVDCVGSVS
SVDPPGGPGCALLVLASACRPGTLRRAIAARARGFVDKDAPPARLLHAITLVAAGKRYVD
HSLSPDFLEAAEMPLTPRELSVLSLAAGGASVSEIARELHLSSGTVRNYMAAINRKTGAR
NRVDAIRISQGAGWV
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgggtcttggtggtgcacgaaacgcggctgctgcgctcggcgctcaccgcgctg
ttgcgcgacgaggagggtatcgacgcggtcgccgcctgctggagaagtgcccccgggcga
gcccgttccttccggccgcaggtgtgcgtcgtcgatgtcgactgcgtgggctcggtgtcc
tcggtggaccctcccggcggcccgggatgtgccctgctggtcctggccagcgcctgccgg
cccggcaccctgcgccgggccatcgccgcccgcgcacggggcttcgtggacaaggacgcg
ccaccggcccggctgctgcacgcgataaccctggtggccgccgggaagcgctatgtcgac
cattcactcagcccggatttcctggaggccgccgagatgccgctgaccccgcgtgagtta
agtgtgctgtcgctcgccgcgggcggcgcctccgtctccgagatcgcccgtgagctgcat
ctgagcagtgggacggtgcgcaactacatggcggcgatcaaccgcaagaccggcgcccgc
aaccgggtggacgccatacggatatcgcagggggcgggctgggtctga
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