Streptomyces tubercidicus: STRTU_006757
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Entry
STRTU_006757 CDS
T09099
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
stud
Streptomyces tubercidicus
Pathway
stud00523
Polyketide sugar unit biosynthesis
stud01100
Metabolic pathways
stud01110
Biosynthesis of secondary metabolites
stud01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
stud00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
STRTU_006757 (rfbH)
Enzymes [BR:
stud01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
STRTU_006757 (rfbH)
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GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WAU15992
LinkDB
All DBs
Position
complement(7824019..7825320)
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AA seq
433 aa
AA seq
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MGYSKSDILELVRSYHQENVVSGFVPGVTPVGASGAVLDEDDRVALVEAALDFRIAAGTS
SRKFERALAKHFGLRKAHLTNSGSSANLLALSALTSHQLEDLRLVPGDEVITVAAGFPTT
VNPILQNGLVPVFIDVELGTYNASVERIEEAIGPRTRAIMIAHALGNPFAVEEVAKIASD
REMFLIEDNCDAMGSTYRGKLTGTFGDLATESFYPAHHITMGEGGCVVTDNMVLARFVES
LRDWGRDCWCEPGEDNRCFKRFDQQMGTLPHGYDHKYIFSHIGYNLKSTDLQASLGLTQL
ARIEEFGAARRHNWARLRAGLDGLPHLLLPEPTPDSDPSWFGFVITVKDSAPFSAAELID
HLESRRVATRRFFAGNLTRHPAYLEREFRVSGPLTNSDIIAERTFWIGVFPGLTDEMIDH
SIRSVTEFVTSRT
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggggtacagcaagagcgacattctggagctggtacgcagctaccaccaggagaacgtc
gtgtccggattcgtcccaggggtgacgccggtgggggcgtcgggcgcggtcctcgatgag
gacgaccgggtcgccctcgtcgaagcggccctcgacttccggatcgcggccggcaccagc
tcccgcaagttcgagcgcgcgctcgccaagcacttcggactgcggaaggcacatctgacc
aactccggttcatcggccaacctgctggcgctcagtgcactgacctcgcatcagttggag
gacctgcggctggtgcccggcgacgaggtcatcacggtggcggccggtttccccacgacg
gtcaacccgatccttcagaacggtctggtgccggtcttcatcgacgtcgaactcggcacc
tacaacgcctccgtggagcgcatcgaggaggccatcggcccgcgcacccgggccatcatg
atcgcccatgcgctcggcaacccgttcgccgtcgaggaggtcgcgaagatcgccagcgat
cgggagatgttcctcatcgaggacaactgcgatgcaatgggcagcacgtaccgcggcaag
ctgaccggcaccttcggggacctggccacggagagcttctatccggctcaccacatcacc
atgggcgagggcgggtgcgtagtgacggacaacatggtgctggcccgcttcgtggagtcg
ctgcgggactgggggcgcgactgctggtgcgagcccggtgaggacaaccgctgcttcaag
cggttcgaccagcagatgggcaccctgccgcacggctacgaccacaagtacatcttctcg
cacatcgggtacaacctgaagtcgaccgatctgcaggcatcgctggggctcacccagctc
gcgcggatcgaggagttcggtgccgcccgtcggcacaattgggcacggctgcgcgccggg
ctggacggtctgccccatctgctgctccccgagcccacgccggacagcgatccgagctgg
ttcgggtttgtgatcacggtcaaggacagcgcgcccttctcggccgccgaactgatcgac
cacctggagtcccggcgggtggccacccgccgcttcttcgccggtaacctcacccgccac
ccggcctacctggaacgggagttccgggtgagcgggccgctgaccaacagtgacatcatc
gccgaacgcaccttctggatcggggtcttccccgggctgaccgacgagatgatcgaccac
agcatccgcagcgtcaccgagttcgtcaccagccgtacctga
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