Streptomyces tuirus: GCM10017668_41520
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Entry
GCM10017668_41520 CDS
T07360
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
stui
Streptomyces tuirus
Pathway
stui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCM10017668_41520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stui03019
]
GCM10017668_41520
03400 DNA repair and recombination proteins [BR:
stui03400
]
GCM10017668_41520
Enzymes [BR:
stui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM10017668_41520
Messenger RNA biogenesis [BR:
stui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GCM10017668_41520
DNA repair and recombination proteins [BR:
stui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GCM10017668_41520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
BCL22309
UniProt:
A0A7G1NHJ1
LinkDB
All DBs
Position
4447700..4449847
Genome browser
AA seq
715 aa
AA seq
DB search
MGATGGTGVMTELDAVTGAGATGAGSAGAGVGAGSGPAGPLGADASEALAALHRVFGYEA
FRGEQEAVIEHVVAGGDAVVLMPTGGGKSLCYQIPSLVRPGTGVVVSPLIALMQDQVDAL
RALGVRAGFMNSTQDFDERRMVEAEFLAGELDLLYLAPERLRLGSTLDLLSRGKISLFAI
DEAHCVSQWGHDFRPDYLALSLLGERWPDVPRIALTATATHATHQEITERLHMPAARHFV
ASFDRPNIQYRIVPKADPKKQLLSFLREEHAGDAGIVYCLSRNSVEKTAEFLSRNGVEAV
PYHAGLDAGTRAAHQSRFLREDGLVVVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQET
GRAGRDGLPSTAWMAYGLNDVIQQRKLIQSGEGDEAFRRRAQAHLDSMLALCETAQCRRG
QLLAYFGQDPDPSGCGNCDTCLTPPETWDGTVAAQKALSTVVRLQRERGQKFGAVQIVDI
LLGKRTGKVIQFDHDQLSVFGIGEELTEGEWRGVIRQLLAQGLLAVEGEYGTLVLTEASG
AVLRREREVPLRKEPKKPVASRSGSSSGSGRGERKGKAAAAELPEELVPAFEALRAWRAE
QAREQGVPAYVIFHDATLREIATVWPTSVGELGGISGVGEKKLTTYGEGVLEVLASLGGP
AGSAPAGDSSPAPAASGQGPAHAACQGPAHAPGQDAGEPDHWPEMDEEPEPDDWI
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgacgggcgggacgggtgtgatgacggaactggacgcggtgaccggagccggg
gcgaccggggccgggtcggccggtgccggggtcggcgcgggcagtggtcctgccgggccc
ctcggcgccgacgcgagcgaggcgctggccgcgctgcaccgggtcttcgggtacgaggcc
ttccgcggcgagcaggaagcggtcatcgagcatgtggtggcgggcggcgacgccgtcgtg
ctcatgcccaccggtggcggcaagtcgctgtgctaccagatcccgtccctggtcaggccg
ggcacgggtgtggtcgtctccccgctcatcgccctgatgcaggaccaggtggacgcactg
cgggcgctgggcgtgcgggccgggttcatgaactccacgcaggacttcgacgagcggcgg
atggtggaggccgagttcctcgccggcgagctggacctgctgtacctggcgccggagcgg
ctgcggctggggagcacgctcgatctactctcccgcggcaagatctccctcttcgcgatc
gacgaagcgcactgcgtctcccagtggggccacgacttccggcccgactacctggcgctg
tccctgctcggcgagcgctggccggacgtgccgcgcatcgcgctgacggcgacggccacg
cacgcgacgcaccaggagatcaccgagcggctgcacatgccggcggcccggcacttcgtg
gcgagcttcgaccggcccaacatccagtaccggatcgtgcccaaggccgacccgaagaag
cagctgctgagcttcctgcgcgaggagcacgcgggcgacgcgggcatcgtctactgcctg
tcgcgcaattcggtggagaagaccgccgagttcctcagccgcaacggcgtcgaggcggtg
ccgtaccacgcgggcctggacgcgggcactcgcgcggcccaccagtcccgcttcctgcgc
gaggacggcctggtcgtggtggcgaccatcgccttcggcatgggcatcgacaagccggac
gtccgtttcgtcgcccacctcgacctgcccaagtcggtcgagggctactaccaggagacg
ggccgggccggccgcgacgggctgccgtcgacggcctggatggcctacgggctgaacgac
gtcatccagcagcgcaagctgatccagtccggggagggcgacgaggccttccggcgccgc
gcccaggcccacctggactcgatgctggcactgtgcgagacggcccagtgccgccggggc
cagctgctcgcctacttcggccaggaccccgacccgtccggctgcggcaactgcgacacc
tgcctgaccccgccggagacctgggacggcaccgtcgcggcgcagaaggccctgtccacg
gtggtccggctgcagcgggagcgcgggcagaagttcggcgcggtgcagatcgtcgacatc
ctgctggggaagcggaccggcaaggtcatccagttcgaccatgaccagctgtccgtgttc
ggcatcggcgaggagctcaccgagggcgaatggcggggcgtgatccggcagttgctcgcc
caggggctgctcgcggtggagggcgagtacggcacgctggtgctgaccgaggccagtggg
gcggtgctgcggcgggagcgggaggtgccgctgcgcaaggagcccaagaagccggtggcc
tcccggtcggggtcctcgtcgggctccgggcggggcgagcgcaagggcaaggctgctgcc
gccgagctgcccgaggagctggtgccggccttcgaggcgctgcgcgcctggcgcgccgag
caggctcgcgagcagggcgtcccggcgtatgtgatcttccatgacgccacgctgcgggag
atcgccacggtgtggccgacgtcggtgggggagctcggcggcatcagcggggtcggcgag
aagaagctcaccacatacggggagggtgtgctggaggtgctcgcgtcgctgggcgggccg
gccggttccgcccccgcgggcgactcgtccccggccccggcagcgtccggccaggggccg
gctcacgccgcatgccaaggaccggctcacgccccgggtcaggacgcgggcgagccggat
cactggccggagatggacgaggagccggagcccgacgactggatatag
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