Spiroplasma turonicum: STURON_0093
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Entry
STURON_0093 CDS
T04034
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stur
Spiroplasma turonicum
Pathway
stur03420
Nucleotide excision repair
stur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STURON_0093 (pcrA)
03430 Mismatch repair
STURON_0093 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stur03400
]
STURON_0093 (pcrA)
Enzymes [BR:
stur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STURON_0093 (pcrA)
DNA repair and recombination proteins [BR:
stur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STURON_0093 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
STURON_0093 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AKU79339
UniProt:
A0A0K1P596
LinkDB
All DBs
Position
99807..101969
Genome browser
AA seq
720 aa
AA seq
DB search
MDKFFINLNNEQLEAVTTVDVPVRIIAGAGSGKTRVITSKIVYLIDNAGIEPKKILAVTF
TNKAASEMKNRVEKALPNLLNKPMITTFHSLCVRILREDGNYIGLSNDFTIIDSADQSRI
VNKIKKDLNINEELTFSTKKIISKLSGWKSKRLSIDYLIDNLINNEEKKIIRIYEKYLQE
LEDKNYVDFDDLILKTHLLLKNDEEIKNKWRNRFNYILVDEFQDTNYDQYDLVKWLSSTN
NLTVVGDPDQTIYSWRGAKIKIILDFNNYFKNAKTVFLNQNYRSTKNILDLANHFIDKNE
QREKKYIHTQNDTGQIIKVKEAASRNYEAKFVAKEIKRLIKEGNYNFSDIFVLYRVNAWS
QEFEKEFHNNGIPFQLIGGFKFKDRKVIKDVTAMIKAVTFKDNLSVEHFLSLIPKVGKVS
IEKLVNLSDELNISLYNLLTENINTAFSINKNLNDIHNALLKGSELVEKNISVLETCNKL
LEYSGYLTRFNPRDNEDRESISNINAFLDQMSNYDKQYVHTKESNILKDFLYNEALVSDQ
DDLEVVNKVTLLTIHAAKGLENKVVFIVGVNRDVFPSYMSFMSKESLEEERRAFYVAMTR
AQELLYVSYVSGEYSNISKGSLIQSRFIEELNPDLYELETNIFFHDSNTYTSNKPKYDVN
TSEIKKEAMKLAKGDKIEHIVFGEGSVIKVQDKYISVAFINPTHGVKMVPINSSTWKKYN
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggataaattttttataaatttgaataatgaacaactagaagcagtaacaactgtagat
gtacctgtaagaattatcgctggtgctggtagtggtaaaactagagtgataacttcaaag
attgtttatttaattgataatgctggtattgaaccaaagaaaattttagcagtaactttt
actaataaagctgcttctgaaatgaaaaatagagttgaaaaagcactaccaaatttatta
aataaacctatgataacaacttttcactctttatgtgtaagaatattaagagaagatggt
aattacattggtttatcgaatgattttacaataattgactctgcagaccaatcaaggatt
gtgaataaaataaaaaaagatttaaatattaatgaggaactaacttttagcacaaaaaag
ataatatcgaaattaagtggttgaaaatctaaaagattatcaattgattatttaatagat
aacttaattaataatgaagaaaaaaaaataattagaatatatgaaaaatatttacaagaa
ttagaagacaaaaactatgttgattttgatgacttaattttaaaaacacatctgttgctt
aaaaatgatgaagaaattaaaaataaatggagaaacagatttaattatattcttgttgat
gagtttcaagatacaaattacgatcaatatgatttagtaaaatggttatcaagtactaac
aatcttacagttgtaggagacccagatcaaacaatttattcttgaaggggagctaaaata
aaaataattcttgattttaataattattttaaaaatgctaagaccgtttttctaaatcaa
aattatagatcaacaaaaaatatacttgatttagcaaatcattttattgataaaaatgaa
caaagagaaaaaaaatacattcatactcaaaatgatactggtcaaataattaaagttaaa
gaagcagcatctagaaattatgaagctaaatttgtagcaaaagagattaaaagattaata
aaagagggaaattacaacttttctgatatttttgttttatacagagttaatgcttgatct
caagaattcgaaaaagagtttcataacaatggaatacctttccaattaattggaggtttc
aaatttaaagatagaaaagtaattaaagatgtgactgctatgattaaagccgtaacattt
aaagataatttatcagttgaacactttttatcacttataccaaaggtaggtaaagtttca
atcgaaaaacttgttaatttatcagatgaacttaacataagtttatataatttattaact
gaaaatattaatactgcattttctataaataaaaatttaaatgatatacataatgcactt
cttaaaggttcagaacttgtagaaaaaaatatttcagttttagaaacttgtaataaatta
ttggaatactctggttatttaactagatttaatccaagagataatgaggatcgcgaatca
attagtaacattaatgcttttttagatcaaatgtctaactatgataaacaatatgttcat
actaaggaatctaatattttaaaagattttttatataatgaagcattagtatctgaccaa
gatgatctagaagttgtaaataaagtaacattactcactattcatgctgctaaaggtctt
gagaataaagtggttttcatcgtgggtgtaaatagagatgtatttccttcttatatgagt
tttatgtctaaggaatcattggaggaagaaagaagagcattttatgttgctatgactaga
gctcaagagttattatatgtttcatatgtaagcggcgagtattctaatatttcaaaaggc
agcttaatacagtccagatttattgaagaacttaatcctgatttatatgaattagagaca
aacatttttttccatgatagtaatacatatacaagtaataaaccaaaatatgatgtaaat
acaagtgaaataaaaaaagaagctatgaaacttgctaaaggtgataaaatagaacatata
gtttttggagaaggttcagttattaaggttcaagataaatacatatctgtagcatttata
aacccaacacatggagtaaaaatggttccaattaattcatcaacttgaaaaaaatataat
taa
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