Streptococcus sp. VT 162: V470_02690
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Entry
V470_02690 CDS
T03287
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
stv
Streptococcus sp. VT 162
Brite
KEGG Orthology (KO) [BR:
stv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stv03400
]
V470_02690
DNA repair and recombination proteins [BR:
stv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V470_02690
Archaeal homologous recombinant proteins
V470_02690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_23
ABC_tran
SMC_N
Motif
Other DBs
NCBI-ProteinID:
AHZ47346
LinkDB
All DBs
Position
575141..578320
Genome browser
AA seq
1059 aa
AA seq
DB search
MRPVQLELTNFGPYRKEVINFTQFDHAPLFLIGGDTGAGKSTLFDAMTVALFATTSGDRN
VEEMRSTFAGPEDDLTKVTFYFQQGNHLYRIERVLQQERGKRGGGTTIQKATASLVIVDK
IGGQEIEKLGDKIKEVSDQIEQILGLNAEQFKQIILLPQNDFSRFLKEDSKTKTQILKKI
FGTGIFDRFQKSLEERLRQSNKDMEKRQAQLDGHFASQVWSEEELAILAQTPAYEKLARL
EELLAQRQDNLEEQKSILKEAHEDLAKLQKSLQTAQDVARIFQELDLAKERYRLEIEEGA
QEQAEAKAHLEELQFAQGLQETISSLKEYQKQLFQLEQDLEIAQEALSAKWQSFEEVKAQ
KEALEAQKEDFLQRKEKLKAWEKDIIYAQSLAQEQEKIKRSRTNYKQLEETYQQASEVIE
SLNKSLSDLEANRLSLESLHEAEKLLQSVGYSVDKQLDQNLKDIEDLNQELAKTEKRHQR
LSLEIDQAQEILKELEEQLSRSLESRRQLMIAQLQAELEDGQPCMVCGSLDHPKVDGTQA
NEVALKNLMDKVEALQVQKEKQVATLSNRQATLNEVETYHQGLLDQVAKVKLTLEKHYQE
LEEQVKGQFEFDFSEDYEAVRGKALLSAVENHYQELQKRYEKEEADLVHCQEELDKAQEK
AIDLAKSYQEAKAALDQAKERLKDLQEAHPELESVEDYQERISLAKQELDLYNKVVKENG
EANNQLRADIQGIKGQLEILTKSKEKTSQETKRLSAELDQSLMAEGALTNDLEQIQFWLL
EVKKQAIPKIQAQLTSYQTLKQELQTQISKGQELLQNQEKPDLAALTQEVQTSQENYDNQ
RAQVSVIEKGLKDTTTTYQAAKTLQESSQEAFKAHQELSDLVKVVKGENTALTGRLNLEV
YVIRQYFQQILDYANANYIGLLTDNRYSFVLSEEGRRARDHFGLDINVYDQLTGSERSVK
SLSGGETFIAALAIALSLSEVVQNTSKGAVVEALFIDEGFGSLDKEALTKAIAVLEQIGE
NRMVGVISHVDDMKEGIAQQLSIIKSHDGSSYIKVMPKD
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagtccagttagaattgaccaattttggaccttatcgtaaggaagttatcaat
tttacccagtttgaccacgctcccctctttttgattggtggggacacaggggctggtaag
agtactctctttgatgctatgacagttgccttgtttgcaacgaccagtggcgatcgtaat
gtcgaggagatgcggtcgacctttgctggtccagaggatgacttgaccaaggtgactttt
tacttccaacaaggcaaccacctttatcgcattgaacgtgttctccagcaggagagaggc
aagcgaggaggtggaacgaccatacaaaaggcaacggcttctcttgttattgtggataag
attggtggtcaagaaatcgaaaagctcggggataaaatcaaggaagttagtgatcagatt
gagcagattttgggtctcaatgccgagcagttcaaacagattatccttcttcctcaaaat
gatttcagtcgtttcttgaaagaagattcaaagaccaagactcaaattttgaagaaaatt
tttggaacaggtatttttgaccgcttccaaaagagcttggaagagcgtcttcgtcagagc
aataaggatatggagaagcgccaggctcaactagatggccattttgccagtcaggtttgg
tctgaggaagaattagctatcttggcccaaacaccagcttatgaaaaattggcacgtctt
gaagaacttttggcgcaacggcaagataatcttgaagagcaaaaaagcatcttaaaggaa
gcccatgaggatttggctaagctgcagaagagcttgcaaactgcacaagatgtggcaagg
attttccaagaattggatctagccaaggagcgttaccgtctggaaattgaggaaggtgct
caggaacaggcagaagcaaaagcgcatctggaggaattgcagtttgcccaaggcttgcag
gaaaccattagcagtttgaaggagtatcagaagcagttgtttcaattagaacaagacctt
gaaatcgctcaagaagcactaagtgctaagtggcagtcttttgaggaagttaaggctcaa
aaagaggcactggaagctcagaaggaggattttcttcaaagaaaagagaaactgaaagcg
tgggaaaaggacattatctatgcccagagtcttgcccaagagcaggagaaaatcaaacgt
tcacgtactaactacaagcagttggaagaaacctatcagcaggcttcggaagtgattgag
tctctaaacaagtctttgtcagatttggaggccaatcgtcttagtttagagagtttgcat
gaggccgaaaaactcctccagtctgtgggttacagtgtggataagcaactggatcagaac
ctaaaagatatagaggacttgaatcaggagttggcaaagaccgaaaaacgtcatcaaagg
ctatccttggaaattgaccaagctcaagaaattctcaaagaattggaagagcagttaagt
aggagtctagaatcacgtcgtcagctcatgattgcccagttgcaggcagaattagaggat
ggtcagccctgtatggtctgtggttccttggatcatcctaaggtcgatggtacacaggct
aatgaagtagctttgaagaatctcatggataaggtcgaggcacttcaagttcaaaaagaa
aagcaagtcgctactttatcaaatcgtcaggctactttgaatgaagttgagacttaccat
caaggtttgctggaccaagtggctaaagttaagctgactcttgaaaaacactatcaagaa
ctcgaagagcaagttaagggacagtttgaatttgacttttcagaggattatgaagctgtc
cgagggaaagccttgttgagtgctgttgagaatcattatcaagaactccaaaaacgctat
gagaaggaagaggcagaccttgtccattgtcaagaggagttagataaggcccaagaaaaa
gcgatagatttggctaagagctatcaagaggccaaggcagcgcttgaccaagctaaggag
cgcctaaaagacttgcaggaagctcatccagagctggagtctgtagaggattatcaagaa
cgaatttcccttgcgaagcaggagttggacctctataataaggtagtcaaggaaaatggt
gaggccaacaaccaacttcgtgccgacattcaaggcatcaaggggcaacttgagatcttg
accaagtctaaagaaaagaccagtcaagaaacgaagcgtttatcggctgaattggaccaa
agtcttatggctgaaggggcgctcaccaatgacctagagcaaatccagttttggctactt
gaagtgaaaaagcaggctattcctaagattcaggcccaattgacaagttaccaaaccctt
aaacaagaattgcagacccagattagtaagggccaagagcttctgcaaaatcaagaaaaa
ccagatttggctgctttaacacaagaggtccaaactagtcaggaaaactatgataatcaa
cgggctcaggtttctgtcattgagaaggggcttaaggatacgacgactacctaccaagca
gccaaaacccttcaagaaagtagccaagaggcctttaaggcccaccaagaactcagcgat
ttggttaaggtggttaagggagaaaatactgctctgactgggcgtctcaatcttgaggtc
tatgttatccgtcagtatttccaacaaatcttagactatgctaatgccaactacattggc
ctcttaacggataaccgctattcctttgtcttgagcgaggaagggcgtagggcgcgtgat
cacttcggtttggatattaacgtctatgaccagctgacaggtagtgaacgctccgttaaa
tccttgtctggtggtgaaacctttatcgccgcactggccattgccctatccctctcagaa
gttgtgcaaaacaccagcaagggtgctgtcgttgaagctctcttcatcgacgaaggtttc
ggttcgctagataaggaagccctcaccaaggctatcgcggtcctagaacaaatcggtgaa
aaccgtatggtcggtgtcatcagtcacgtggacgatatgaaagaaggtattgcccaacaa
ctctctatcatcaagtcacacgatggtagtagttatattaaggttatgccgaaagattag
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