Streptococcus sp. VT 162: V470_07575
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Entry
V470_07575 CDS
T03287
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
stv
Streptococcus sp. VT 162
Pathway
stv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V470_07575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stv03019
]
V470_07575
Messenger RNA biogenesis [BR:
stv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V470_07575
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
DivIVA
V-ATPase_G
KH_KhpA-B
dUTPase
DUF7260
Motif
Other DBs
NCBI-ProteinID:
AHZ48272
LinkDB
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Position
complement(1512067..1513680)
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AA seq
537 aa
AA seq
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MEIMTLAIAVFAVIIGLVIGYVSISAKMKSSQEAAELMLLNAEQEATNLRGQAEREADLL
LNEAKSESKSLKKEALLEAKEEARKYREEVDAEFKSERQELKQIESRLTERAASLDRKDD
NLTNKEKTLEQKEQSISDRAKNLDAREEQLEEVERQKEAELERIGSLSQTEARDIILAQT
EENLTKEIASRIREAEQEVKERSDKIAKDILVQAMQRIAGDYVAESTNSTVHLPDDTMKG
RIIGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMEMLLKDGRIHPAR
IEELVEKNRQEIDNKIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEV
AKLSGIIASELGENAALARRAGFLHDIGKAIDREVEGSHVEIGTELARKYKEHPVVVNTI
ASHHGDVEAESVIAVIVAAADALSAARPGARSESLESYIKRLHDLEEIANGFEGVQNSFA
LQAGREIRIMVNPGQIKDDKVTILAHKVREKIENNLDYPGNIKVTVIRELRAVDYAK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcatgacacttgcgattgctgtttttgccgtcatcattggtttagtcattgga
tatgtcagcatctcagctaagatgaaatcatctcaagaggctgcagagttgatgcttcta
aatgctgaacaagaagcaactaatttacgaggacaagctgagcgcgaagcggatttattg
ctaaatgaagccaagagcgaaagcaagtctcttaaaaaagaagcactattggaggccaaa
gaggaagccagaaaataccgtgaagaagtggacgctgaatttaagtcagaacgtcaggag
ctcaagcaaattgaaagtcgtttgacggagagagctgcgagccttgaccgtaaggacgac
aatttgacgaacaaagaaaaaacacttgaacaaaaagaacaaagtatttctgatagagca
aaaaaccttgatgcacgtgaagagcaattagaggaagtcgaaagacaaaaagaagctgaa
cttgaacgtatcggctccctttcccaaactgaggctcgagatattatcttggctcagaca
gaggaaaacttaaccaaggaaattgctagccgcattcgtgaggcagagcaagaagtcaag
gaacgttcagacaagattgcgaaagatatcttggttcaggctatgcagcgtatcgctggt
gactatgtagcagagtcaacaaactcgacagttcacctaccagatgataccatgaaggga
cgcattatcggacgcgaaggtcgaaacattcgtacctttgaaagtttgacaggggtagat
gtcatcattgacgacacgccagaagtggtaaccttgtcaggatttgatccgattcgtcgt
gaaattgctcgtatgaccatggaaatgttgctcaaggatggtcgcatccacccagctcgt
atcgaggagttggtggagaaaaaccgtcaggagattgacaataaaatccgtgaatatggt
gaggctgctgcctatgagattggtgcgccaaacctccatccggacttgatgaagattatg
ggacgcttgcagttccgtacttcatacggacaaaatgtcttgcgtcattcgattgaggtt
gctaagttatctggtatcatcgccagtgaacttggtgaaaatgcagctcttgcccgtcgt
gctggattccttcacgacatcgggaaagctattgaccgcgaggttgaaggtagccacgtt
gagattggtacagagttggcacgcaagtacaaggaacacccagttgtggtgaataccatt
gctagccaccacggcgatgtggaagccgaaagcgtcattgcagtgatcgttgctgcagca
gatgccttgagtgcagcgcgtccaggtgctcgtagtgaatctcttgaaagctacatcaag
cgtctccatgatttggaagaaatcgccaatggctttgaaggagtgcaaaatagttttgcc
cttcaagcaggacgtgaaatccgtatcatggttaatccaggacaaatcaaagacgacaaa
gtcacaatcttggctcacaaagttcgtgagaaaattgaaaacaatctcgattacccagga
aatatcaaggtaaccgtgattcgcgaacttcgtgcagtagattatgctaaataa
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