Streptococcus sp. VT 162: V470_09620
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Entry
V470_09620 CDS
T03287
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
stv
Streptococcus sp. VT 162
Pathway
stv03030
DNA replication
stv03410
Base excision repair
stv03420
Nucleotide excision repair
stv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V470_09620
03410 Base excision repair
V470_09620
03420 Nucleotide excision repair
V470_09620
03440 Homologous recombination
V470_09620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stv03032
]
V470_09620
03400 DNA repair and recombination proteins [BR:
stv03400
]
V470_09620
Enzymes [BR:
stv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V470_09620
DNA replication proteins [BR:
stv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
V470_09620
DNA repair and recombination proteins [BR:
stv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
V470_09620
NER (nucleotide excision repair)
GGR (global genome repair) factors
V470_09620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AHZ48663
LinkDB
All DBs
Position
complement(1943875..1946508)
Genome browser
AA seq
877 aa
AA seq
DB search
MDKKKLLLIDGSSVAFRAFFALYQQLDRFKNANGLHTNAIYGFQLMLNHVLERVDPSHVL
VAFDAGKTTFRTEMYADYKGGRAKTPDEFREQFPFIRELLDHLGIRHYELAQYEADDIIG
TLGRLAEKDSFDVTIVSGDKDLIQLTDEHTVVEISKKGVAEFEAFTPDYLMEKMGLTPAQ
FIDLKALMGDKSDNIPGVTKVGEKTGIKLLLEHGSLEGIYENIDGMKASKMKENLINDKE
QAFLSKTLATIETQAPIEIGLDDLVYNGPDVEKLGKFYDEMGFKQLKQALNISSTDVPES
LDFTIVDHVSQDMLSADSIFHFELFGENYHTDDLVGFAWSCGDKLYTTDKLELLQDPILK
EFLEKTPLKVYDFKKAKVLLNRLGLNLQAPAFDSRLAKYLLSTVENNEISTIASLYGQTY
LADDETFYGKGVKKAIPEREKFLEHLARKVAVLVETEPVLLEKLSEHGQLDLLYDMEQPL
AFVLAKMEIAGIKVKKETLLEMQAENEVVIEQLTQEIYELAGEEFNINSPKQLGVLLFEK
LGLPLEYTKKTKTGYSTAVDVLERLAPIAPIVKKILDYRQIAKIQSTYVIGLQDWILDDG
KIHTRYVQDLTQTGRLSSVDPNLQNIPVRLEQGRLIRKAFVPEWEDSVLLSSDYSQIELR
VLAHISKDEHLIKAFQEGADIHTSTAMRVFGIERPEDVTPNDRRNAKAVNFGVVYGISDF
GLSNNLGISRKEAKAYIDTYFERFPGIKNYMDEVVREARDKGYVETLFKRRRELPDINSR
NFNIRGFAERTAINSPIQGSAADILKIAMIQLDKALVEGGYQTKMLLQVHDEIVLEVPKS
ELAAVKTLVKQTMEEAIQLRVPLIADENEGATWYEAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaaaaaattattattaattgatggatcttctgttgcttttcgagcttttttt
gcgctctatcagcagttggatcgttttaaaaatgctaatggccttcataccaatgcaatc
tatggctttcaactcatgttgaatcatgtcttagagcgggttgaccccagtcatgttttg
gtagcctttgatgctggtaagacgactttccgaacagagatgtatgcagactacaagggt
ggccgtgctaaaactccagatgagtttcgtgagcaatttcccttcattcgtgagttgtta
gaccatcttgggattcgccattatgagttggcccagtatgaagccgatgatatcatcggg
actttaggccgtttggctgagaaggattcttttgatgtgacaatcgttagcggagataag
gatttgatccagttgacggacgagcatacggtggtagagatttccaaaaaaggtgtggct
gagtttgaggcctttacgccggactatctcatggaaaagatgggcctcacgccagctcag
ttcattgatcttaaggccctcatgggggataagtctgataatatccctggtgtcacgaaa
gtcggtgaaaagacgggtatcaagctcttgctggaacatggttcgctcgagggtatttat
gaaaatatcgatgggatgaaggcttctaagatgaaggaaaatctcatcaatgacaaggaa
caggcctttttatctaaaacactagcgaccattgagactcaggcaccaattgagattgga
ctagatgatttggtctataatggcccagatgtggaaaaacttgggaaattctatgatgag
atgggcttcaaacagctcaaacaagctttaaatatttcatcgacagatgtgcctgaaagt
ttggatttcactatcgttgaccacgtcagtcaagacatgctgagtgccgactctatcttc
cactttgaactctttggggaaaactaccatacagatgatttggttggttttgcctggtcc
tgtggggataaactttacactacagataaacttgagctcttgcaggatccgatcctcaag
gaatttctagaaaaaacacctctgaaagtgtatgactttaagaaagcgaaggttctttta
aatcgcttgggcttgaatctccaggcacctgcttttgacagtcgtttggcaaaatactta
ctctcaacagtcgagaacaatgaaatttcaaccattgcgagtctctacggccagacttat
ctggctgatgatgagactttctacggtaagggtgtcaagaaagccatccctgagagagag
aaattcttggagcacttggctcgcaaggttgctgtattggttgagactgagccggtttta
cttgaaaaactcagtgaacatgggcaattagaccttctctatgacatggagcaacctctg
gcttttgtccttgccaagatggaaattgctggaatcaaggtcaaaaaagaaaccctactt
gagatgcaggctgaaaatgaggtcgtcattgagcaactcactcaagagatttatgagcta
gctggtgaggagtttaatatcaactcccctaagcagttgggcgtgcttctctttgaaaaa
ctgggtcttcctctagagtacactaagaaaaccaagacaggttactcgacggccgtggat
gtgctagagcgtctagctcctattgctccgattgttaagaaaatcctcgactaccgtcag
attgctaagatccaatctacctatgtgattggtttgcaagactggattttggatgatggc
aagatccacacgcgttacgtgcaagatttgactcagaccggacgtctgtctagtgtagat
ccaaacttgcaaaatatccctgttcgtttggaacaaggccgtctcattcgtaaggccttt
gtacctgaatgggaggatagtgttcttcttagctcggattattcgcagattgagttgcgc
gttttggctcatatttctaaagatgagcacttaattaaggcctttcaagagggagcagat
atccatacctcgacggccatgcgggtttttggaattgaacgtcctgaagatgtgactcca
aacgaccgtcgtaatgccaaggcggtaaactttggagtggtttacgggatttcagacttt
ggtttgtctaataatctgggcatcagccgtaaggaagcaaaagcctacattgacacttac
tttgaacgcttcccaggtattaaaaactacatggacgaggtggtgcgtgaggcgcgtgat
aagggttatgtagagactctcttcaagcgtcgtcgtgagttaccagatatcaattcgcgc
aacttcaacattcgtggttttgcagagcggactgccatcaactctcctatccagggttcg
gcagcagatatcctcaagattgctatgatccagctagacaaagctctagttgaaggtggc
tatcagaccaagatgctgttgcaagtgcatgatgaaatcgtcctcgaggttccgaaatca
gaactagcagccgtcaaaactctagtgaaacaaaccatggaagaagccatccaactccgt
gttccccttatcgcagatgaaaacgaaggggcaacctggtacgaggctaaataa
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