Streptomyces sp. VB1: OH133_01120
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Entry
OH133_01120 CDS
T11054
Name
(GenBank) DEAD/DEAH box helicase
Organism
stvb Streptomyces sp. VB1
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
AAA_22
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
UZI26822
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Position
254625..257639
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AA seq
1004 aa
AA seq
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MHRHPAATPSEIAELARCSAVFVPADPARTGRIAFWNPDGSTPSDTPGPLSELTVIGTDL
RPRTVTAQYLPVRDALPLLTRARAVAGASPATAFWGAAALLALQFVARGLLLPGLSDSDH
DAWRIGPLNADDLERIRELAASMPPAAHATPAQREVLGRLTAVGETLLPEPERLLRAFLD
AVADAMPRTPAAGFATAGPAFTSQEPQHLPAGRAWAADVAAGHDAGVRLSLRIEVAGVAS
RRSGTEAGPEATPEAMGPGSGPGAVGAGSGPELAGPELAAPSFRAVLQIHSVSDPSLVAD
AAEVWAGDSRTAAAFGVRARMDALLTLRRAARAWPPLAPLLSAAVPDSVEPADEEIAELL
GSASRALAAAGVQVHWPRELARKLTARAVIGPDDRDSTDREGVGQEAGTRGRTAADVPSF
LSADALLSFDWRFALGDQKLTREELDRLAESTRPIVRLRDQWVLIDPEEARRARDTQDRK
VTPIDALGAVLTGSTEVDGRRVEVAATGWLQRLRDRLADPESAAQQSIGQPETLTATLRD
YQLRGLNWLNTMTSLGLGGCLADDMGLGKTITLIALHLHRQSDRDAAGPTLVVCPTSLMG
NWQREIERFAPGTPVRRFHGASRSLEGLVDGEFVLTTYGTMRLDAPRLAAASWGMVVIDE
AQHVKNPHSATAKQLRTIGARARVALTGTPVENNLSELWAILDWTTPGLLGRLGAFRTRY
AAAVESGSDPGAAERLAALVRPFLLRRRKSDPGIAPELPPKTETDRAVSLTPEQTGLYEA
VVRETLAEISAADGFERRGLVMKLLTALKQICNHPAQYLKEEQPRIADRSGKVELLDELL
DTILAEQGSVLVFTQYVQMARLLEEHLAARGVDTQFLHGGTPVARREEMVNRFQAGDAPV
FLLSLKAAGTGLNLTRAGHVVHFDRWWNPAVEAQATDRAYRIGQTQPVQVHRLIAEGTIE
DRISEMLARKQGLADAVLGSGEAALTELTDAELADLVELRGGAR
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
gtgcacaggcaccctgcggcaacgccctccgagatcgccgaactggctcgctgctccgca
gtcttcgtccccgcggatccagcccgtaccggcaggatcgcgttctggaacccggacggt
agcaccccttccgacactcccgggcctttgtcggagctgaccgtcatcggaaccgacctg
cgaccccgtacggtgacggcgcagtacctccccgtgcgggacgccctgccgttgctgacc
cgggcacgcgccgtcgcgggtgcctcacccgccaccgccttctggggcgccgccgcgctt
ctcgctctccagttcgtcgcgcgcggcctcctgttgccagggctgagcgatagcgaccac
gacgcctggcggatcgggccgttgaacgccgacgacctcgaacggatccgggaactggcg
gcgtcgatgccgccggccgcccacgcgacccccgcccagcgcgaagtgctcggccgcctc
accgccgtcggcgaaacgttgctgcccgaaccggaacgcctgctgcgcgcgttcctcgat
gccgtcgccgacgcgatgccccgtacgccggccgcaggattcgccaccgcaggtcccgcg
ttcacctcccaggagcctcagcacctgcccgcgggacgggcctgggcggccgatgtggcg
gccggtcacgacgcgggcgtacggctctccttgcgtatcgaggtcgcgggtgtggcctcg
cggcggagcggcacggaggcgggccccgaggccacaccggaagcgatgggcccgggatcg
ggcccgggggcggtgggtgcggggtccggtccggagctggccggtccggagctggccgcc
ccctcgttccgtgccgtgctgcagatccacagtgtcagcgatccctccctcgtcgccgac
gcggccgaggtgtgggcgggcgactcgcggaccgccgccgcgttcggggtccgggcccgg
atggacgccctcctcaccctgcgccgggccgcccgcgcctggccgccgctggcgccgttg
ctctccgccgcggtgccggactcggtggaaccggccgacgaggagatcgccgagctgttg
gggtcggcctcgcgcgccctggccgccgccggagtacaggtgcactggcccagggaactg
gccaggaagctcaccgcgcgcgccgtgatcggcccggacgaccgggactccacggaccgg
gaaggcgtcgggcaggaggccgggacgcggggacgcaccgccgcggacgttccctcgttc
ctctccgccgacgcactgctgtcgttcgactggcggttcgcactcggcgaccagaagctg
acccgcgaggagctggaccggctcgccgagtccacccggcccatcgtgcggctgcgcgac
cagtgggtgctcatcgaccccgaggaggcgcgccgcgcccgggacacccaggaccgcaag
gtcaccccgatcgacgctctcggcgcggtgctgaccggttcgacggaggtggacggccgt
cgcgtcgaagtggcggcgaccggctggctccagcggctgcgggaccggctggccgacccg
gaatccgccgcccagcagtcgatcgggcagcccgagacgctcaccgcgaccttgcgcgac
taccagctgcgcggcctgaactggctgaacaccatgacctcgctcggcctcggcggctgc
ctcgccgacgacatgggcctcggcaagacgatcacgctcatcgccctgcatctgcaccgg
cagagcgaccgcgacgcggccggcccgacgctggtggtgtgcccgacatctttgatgggc
aactggcagcgggagatcgagaggttcgcgccgggcacccccgtacgccgcttccacggc
gcgtcgcgttccctggaaggcctggtggacggcgagttcgtcctgacgacctacggcacg
atgcgcctcgacgcgccccggctcgccgccgcgtcctggggcatggtcgtcatcgacgag
gcgcagcacgtcaagaatccgcactccgcgacggccaagcagctgcggaccatcggggcc
cgggcccgggtcgcgctcaccggcacccccgtcgagaacaacctctccgagctgtgggcg
atcctggactggacgacacccggcctgctcggccggctcggcgccttccgtacgcggtac
gcggcagcggtcgagagcggcagcgacccgggcgcggccgagcggctcgcggcgctggtg
cggccgttcctgctgcgccgccggaagtccgatccggggatcgctccggagctgccgccg
aagaccgagaccgaccgggccgtgtcgctgacgccggaacagaccggcctgtacgaggcg
gtggtccgcgagaccctggcggagatctccgccgccgacggcttcgagcgccgaggtctc
gtgatgaagctgctgacggcgctgaagcagatctgcaaccacccggcgcagtacctcaag
gaggaacagccgcggatcgcggaccggtcggggaaggtcgagctgctggacgaactcctg
gacacgatcctggccgagcagggttcggtgctggtcttcacgcagtacgtgcagatggcc
cggctgttggaggaacacctggccgcgcgcggagtggatacgcagttcctgcacggcggt
acgcccgtggcccggcgcgaggagatggtgaaccgcttccaggcgggcgatgccccggtg
ttcctgctgtccctcaaggctgcgggcaccgggctcaacctcacccgggccggtcatgtc
gtgcacttcgaccgctggtggaacccggcggtcgaggcgcaggcgacggaccgggcctac
cgcatcgggcagacccagccggtgcaggtgcaccggctgatcgccgagggaacgatcgag
gaccggatctccgagatgctcgcccgcaagcagggactcgcggacgcggtgctcggctcg
ggcgaggcggcactgaccgaactgaccgatgcggaactggccgacctggtcgagctgcga
gggggcgcacgatga
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