Streptomyces sp. VB1: OH133_02580
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Entry
OH133_02580 CDS
T11054
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
stvb Streptomyces sp. VB1
Pathway
stvb00300
Lysine biosynthesis
stvb00470
D-Amino acid metabolism
stvb01100
Metabolic pathways
stvb01110
Biosynthesis of secondary metabolites
stvb01120
Microbial metabolism in diverse environments
stvb01230
Biosynthesis of amino acids
Module
stvb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OH133_02580
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OH133_02580
Enzymes [BR:
stvb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
OH133_02580
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
UZI27084
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Position
597374..598756
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AA seq
460 aa
AA seq
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MTQTTPAHHEGGTTAPAARFDAVVRAAVGQGLLGEGRPVAGFIDTEGVRASVDDLHEAFA
ATPEVLHTFAAKACSLVPVLRLLADRGMGCEVASPGELRLAVEAGFAASRVVLDSPAKTR
EEIRLALALGVAVNADSLDELRRIDALRNPATASVLGLRVNPQVGGGSIGPMSTATDTSK
FGVALRDPGAREAIVRAFRQRPWLTRLHAHVGSQGCPMELIADGVARTYELAEEINATLG
VRQVTSLDIGGGLPVNFADETVRPSYADYVAALTAAAPGLFSGRYSLVTEFGRSLLAKNG
FIGARVEYTKDAGGRRIALTHAGAQTATRTVLMPDAWPLRIGAFGPDGTPKGGPPLAQDI
AGPCCFAGDVVAYGRELPELAEDDVVVLYDTGAYYFSTPWAYNSLPRPAVYGFRAVAGLK
DGSGHDGQVTFVTVRDAQSLDDIAAESGLAHADALIERAD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagacgactcccgcgcaccacgagggcggcacgacagcgccggccgcccgcttc
gacgccgtcgtccgggcggccgtcggacaggggctgctgggcgagggccgcccggtcgcc
ggtttcatcgacacggagggcgtgcgcgcctccgtcgacgacctgcacgaggccttcgcc
gccacacccgaggtactgcacaccttcgcggccaaggcctgctccctcgtcccggtactg
cggctgctcgccgaccgcggcatggggtgcgaggtggcgagccccggtgaactgcgactg
gccgtggaggccgggttcgccgcgtcccgtgtcgtcctggactcccccgccaagacccgc
gaggagatccggctggcgctcgcgctcggcgtcgccgtcaacgccgacagcctcgacgaa
ctgcgccgcatcgacgcccttcgcaacccggccaccgcctcggtcctcggactgcgggtc
aaccctcaggtgggcggtggctccatcgggccgatgagcacggcgaccgacacctcgaag
ttcggggtcgcgctgcgcgacccgggagcccgcgaggcgatcgtgagggccttccggcag
cgaccgtggctgacccggctgcacgcccatgtgggctcccagggctgcccgatggagctg
atcgcggacggggtggcacggacgtacgagctggccgaggagatcaacgcgacgctgggc
gtccgacaggtcaccagcctggacatcggcggcggacttccggtcaacttcgccgacgag
accgtacgccccagctacgcggactacgtggcggcgctgacggcggccgcccccggcctc
ttctcgggccgctactccctggtcacggagttcggccggtcgctgctggcgaagaacggg
ttcatcggggcccgggtggagtacacgaaggatgccgggggccgccggatcgcgctcacc
cacgcgggagcgcagaccgccacccgtaccgtcctcatgcccgacgcctggccgttgcgg
atcggggcgttcggcccggacggcacgcccaagggcggcccgccgctggcgcaggacatc
gcgggaccgtgctgcttcgcgggggacgtggtggcgtacggccgggagctgccggagctg
gccgaggacgatgtggtcgtgctgtacgacacgggggcgtactacttctccaccccgtgg
gcgtacaacagtctgccccgccccgcggtgtacggcttccgggcggtggcggggctgaag
gacggctcgggtcacgacggacaggtgacgttcgtgacggtgcgggacgcgcagtcgctg
gacgacatcgcggcggagagcggtctcgcgcacgcggacgcgctgatcgaacgggccgat
tga
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