Streptomyces sp. VB1: OH133_04445
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Entry
OH133_04445 CDS
T11054
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
K10440
ribose transport system permease protein
Organism
stvb Streptomyces sp. VB1
Pathway
stvb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OH133_04445
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
OH133_04445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stvb02000
]
OH133_04445
Transporters [BR:
stvb02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
OH133_04445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
BPD_transp_2
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
UZI27427
LinkDB
All DBs
Position
complement(1042569..1044527)
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AA seq
652 aa
AA seq
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MATETAKSDAGTGGGVSVIRRVLLDNGALSALVVLVVAMSLLSGDFLTTQNLLNVGVQAA
VTAILAFGVTFVIVSAGIDLSVGSVAALSATVLAWSATSAGVPVVLAVVLAILTGIACGF
VNGALISYGKLPPFIATLAMLSIARGLSLVISQGSPIAFPDSVSVLGDTLGGWLPVPVLV
MIAMGLITALVLGRTFIGRSMYAIGGNEEAARLSGLRVKRQKIVIYALSGLFAAVAGIVL
ASRLVSAQPQAAQGYELDAIAAVVIGGASLAGGVGKASGTLIGALILAVLRNGLNLLSVS
AFWQQVVIGVVIALAVLLDTLRRKAGSGAASSAGTAPGAPGAGRRNALKLGGAALCVAVV
VGGVSFFNSGRSGGTTKVGMSLSTLNNPFFVQMKEGAQEEAEKAGIDLTVTDAQNDASQQ
ANQLQNFTSSGVSSIIVNPVDSDAVGPGVRSANKADIPVIAADRGVNKAETATLVASDNV
AGGRLAADALADKLGGKGSIVILQGTAGTSASRERGAGFAEGLKVYPGIKVVAKQPADFD
RTKGLDVMTNLIQSHPGVTGVFAENDEMALGAAKALGSKAGKSVSVIGFDGTPDGLKAVE
AGTLYASVAQQPAELGKIAVRNAVKAAKDEKVESTVKVPVKVVTRENVADFS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
gtggccactgagacagccaagagtgacgcgggaacgggcggcggagtctccgtgatacgc
cgcgtcctgctcgacaacggcgcgctcagcgccctggtcgtcctggtggtggcgatgtcg
ctgctctccggcgacttcctgaccacccagaacctgctgaacgtcggcgtccaggcggcc
gtcaccgccatcctcgcgttcggcgtcaccttcgtcatcgtctcggcgggcatcgacctg
tccgtcggttcggtggcggccctgtccgcgacggtcctcgcctggtcggcgacatccgcc
ggcgtgccggtcgtcctggccgtcgtcctcgcgattctcacgggcatcgcctgcggcttc
gtgaacggcgccctcatctcgtacggcaaactcccgccgttcatcgcgacgttggcgatg
ctctcgatcgcccgcggtctctccctcgtcatctcgcagggcagcccgatcgccttcccc
gactccgtctcggtgctcggcgacaccctcggcgggtggctccccgtaccggtcctcgtg
atgatcgcgatgggcctgatcaccgcactggtcctcggccgcaccttcatcggccgctcg
atgtacgcgatcggcggcaacgaggaagcggcccggctctccgggctccgcgtcaagcgc
cagaagatcgtcatctacgcgctgtccggcctcttcgccgccgtcgcgggcatcgtcctg
gcctcgcgcctcgtctccgcccagccgcaggccgcccaggggtacgaactcgacgccatc
gccgcggtcgtcatcggcggggcgagcctggccggcggtgtcggcaaggcgtccggcacc
ctgatcggcgcgctcatcctcgccgtcctccgcaacggcctcaacctcctctccgtgtcg
gcgttctggcagcaggtcgtcatcggcgtcgtcatcgcgctcgccgtcctgctggacacc
ctgcgccgcaaggccggttcgggagcggcctcctccgcgggcaccgcccccggcgcaccg
ggggccggccgcaggaacgcgctgaagctgggcggtgcggccctctgcgtggccgtcgtc
gtcggcggggtctccttcttcaactccggccgttccggcggcacgacgaaggtcggcatg
tccctctccacgctcaacaaccccttcttcgtgcagatgaaggaaggagcacaggaggag
gcggagaaggcgggcatcgacctcaccgtcaccgacgcccagaacgacgcctcccagcag
gccaaccagctccagaacttcaccagctccggcgtctcctcgatcatcgtcaacccggtg
gactcggatgccgtcggcccgggcgtccgcagcgccaacaaggcggacatccccgtgatc
gccgcggaccggggcgtcaacaaggcggagaccgcgacgctcgtcgcctcggacaacgtg
gcgggcggcaggctcgccgccgacgcgctggccgacaagctcggcggcaagggcagcatc
gtcatcctccagggcacggcgggcacctccgccagccgtgagcgcggggccggtttcgcc
gagggactcaaggtgtacccgggcatcaaggtggtcgccaagcagcccgcggacttcgac
cgcaccaagggcctcgacgtcatgaccaacctcatccagtcgcaccccggcgtcaccggc
gtcttcgccgagaacgacgagatggcgctcggcgcggccaaggcactcggcagcaaggcc
gggaagtccgtctccgtcatcggcttcgacggaaccccggacggcctgaaggcggtcgag
gccggcacgctctacgcgtcggtggcccaacagcccgccgaactgggcaagatcgcggtg
cggaacgccgtgaaggccgcgaaggacgagaaggtcgagagcacggtgaaggtgccggtc
aaggtggtcacccgggagaacgtcgccgacttctcctga
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