Streptomyces sp. VB1: OH133_04790
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Entry
OH133_04790 CDS
T11054
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
stvb Streptomyces sp. VB1
Pathway
stvb02024
Quorum sensing
stvb03060
Protein export
stvb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
OH133_04790 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OH133_04790 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OH133_04790 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
stvb02044
]
OH133_04790 (secD)
Secretion system [BR:
stvb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
OH133_04790 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
UZI27494
LinkDB
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Position
complement(1118091..1120466)
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AA seq
791 aa
AA seq
DB search
MTRATTVRAVLAVAVLLVSVYISLTMSPRLGLDLQGGTRIVLQARDTATVEADRETTDRT
LEVLRQRIDSLGVSEPTLTRSGENRIIVELPDVQDPRQAAEVIGRTAQLTFHAVEGPAAE
EPDEKPSGSDPTADPGSTADPGPTTDPDRLTLPDEQGRALALGPSRLSGAGVEDATAGFD
AQGGAGWSVSLEFREDAGQDWKRLTGEAACHPAGDDRRRVAIVLDEKVISSPQVDPSVGC
RAGLPSGATQITGSFSADEARDLALLIKGGALPVPVEIVEQRTVGPTLGAAAIDASARAA
LIGAAATALFITLVYRLFGALAAVALAAYGVISYAALVALGVTLTLPGLAGFVLAIGMAV
DANVLVFERAREECAAGPKRSLRSALATGFTKAWSAVADSNATTLIAAGLLFFLGSGPVK
GFGVTLAIGVIASMFSALVIARALTEIAESTRFVSDYRGVNGIARPGAVRTWLVRKDPEL
FRKPVRWLVVSAALVAVAVAGIVVRGVDLGVEFTGGRLVEYSTSRPVDVETARDTLAAAG
FGDAEVTTAGEGDLSVRTGKLDNDGEHALRTALAEEGGETTKVRDELIGPSLGDELRRNA
LIALGVAVAVQLAYLAVRFRWTFAVASVGAMVHDVILVVGAFAWLGRPVDGIFLAALLTV
IGYSVNDSVVVFDRVRETWGANRRTPLDTIARRAVLQTVPRTVNTGVGALFILAALAVLG
GDSLADFALALLIGIVVGTWSSVFTAVPGAILLERNAKAPPPAPGKRKGKGSAGGSAGAS
RRDPLDNGARV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcgccaccacggtgcgagcggttctggccgtcgccgtcctgctcgtctccgtc
tacatcagcctgaccatgtcgcccagactcggcctcgatctccagggcggcacccgtatc
gtgctccaggcccgggacaccgccaccgtcgaggcggaccgggagaccaccgaccgcacc
ctggaggtgctgcggcagcgcatcgactcgctgggcgtctccgagccgaccctgacccgg
tccggcgaaaaccggatcatcgtcgaactgcccgacgtccaggatccgcgccaggccgcc
gaagtgatcggccggacggctcagctcaccttccacgcggtcgagggtccggcggccgag
gagccggacgagaaaccttcgggctccgatcccaccgccgacccgggctccaccgccgac
cccgggcccaccaccgaccccgaccggctgaccctccccgacgagcagggccgcgccctc
gccctcggcccctcccggctctccggcgcgggcgtcgaggacgccaccgcgggcttcgac
gcgcagggcggtgccggctggagcgtctcgctcgaattccgcgaggacgccggtcaggac
tggaagaggctgaccggcgaggccgcctgccatcccgccggggacgaccgccggagggtc
gccatcgtcctcgacgagaaggtcatctcctcgccgcaggtcgacccctcggtcggctgc
cgggccggactgccgtccggggccacccagatcaccggctcgttcagcgcggacgaggcg
cgtgacctggcgctgctcatcaagggcggggccctgcccgtgcccgtcgagatcgtcgag
cagcggaccgtcggcccgacgctcggcgcggctgccatcgacgcgagcgcccgggcggcc
ctcatcggcgcagccgccactgcactcttcatcacgctcgtctaccgactcttcggtgcg
ctggccgccgtggcgctggccgcgtacggggtgatctcctacgccgcgctcgtcgccctc
ggtgtcacgctgacgctccccgggctcgccggtttcgtcctggcgatcgggatggcggtc
gacgcgaacgtcctggtcttcgaacgggccagggaggagtgcgccgcagggccgaaacgc
tccctgcgctccgcgctggccaccggattcacgaaggcgtggagcgcggtcgccgactcc
aacgcgaccacgttgatcgcggccgggctgctcttcttcctgggctcgggtccggtcaag
ggcttcggggtcacgctcgccatcggggtcatcgcctcgatgttctccgcgcttgtcatc
gcccgcgcgctcaccgagatcgccgagagcacccgcttcgtcagcgactacaggggcgtc
aacggcatcgcgcgccccggcgccgtgcggacctggctggtccgcaaggacccggagctc
ttccggaagccggtccgctggctcgtcgtctcggcggccctggtcgccgtcgcggtggcc
gggatcgtggtgcgcggcgtcgatctgggcgtggagttcaccgggggccggctggtggag
tactccacgagccgcccggtcgacgtcgagacggcccgggacacgctcgccgccgccggg
ttcggggacgccgaggtcaccacggccggggaaggcgacctgtccgtacgcacagggaag
ctcgacaacgacggtgaacacgccctgcggaccgccctcgccgaggaagggggcgagacg
acgaaggtgcgggacgagctgatcggcccgagcctcggcgacgagctgcggcgcaacgcc
ctgatcgccctcggggtcgccgtcgccgttcagctggcctacttggcggtccggttccgc
tggacgttcgccgtggcctccgtgggggccatggtgcacgacgtgatcctcgtggtgggg
gccttcgcctggctggggcggccggtggacggcatcttcctggccgccctgctcaccgtg
atcggctactcggtcaacgactcggtggtggtcttcgaccgggtacgggagacgtggggg
gcgaaccggcggacaccgctggacaccatcgcccgccgggccgtcctccagaccgttccg
cgcacggtgaacaccggggtgggcgcgctgttcatcctggccgccctcgcggtgctgggc
ggcgactcgctcgccgacttcgcgctcgccctgctcatcggcatcgtcgtgggcacgtgg
tcctcggtgttcaccgccgtacccggggccatcctcctggagcggaacgccaaggccccg
ccgcccgcccccgggaagcggaaggggaagggctcggcaggcgggagcgcgggcgcgtcc
cggcgcgatccgctcgacaacggagcgcgcgtctga
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