Streptomyces sp. VB1: OH133_05355
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Entry
OH133_05355 CDS
T11054
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
stvb Streptomyces sp. VB1
Pathway
stvb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OH133_05355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stvb03400
]
OH133_05355
Enzymes [BR:
stvb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
OH133_05355
DNA repair and recombination proteins [BR:
stvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
OH133_05355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UZI27598
LinkDB
All DBs
Position
complement(1245618..1246397)
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AA seq
259 aa
AA seq
DB search
MRIATYNVNSITARLPRLLAWLESSGTDVLCVQETKCTAEQFPTAALAELGYESAVNATG
RWNGVALLSRVGLSDVVTGLPDGPEYDGVQEPRAIAATCGPLRLWSVYVPNGREVAHEHY
AYKLRWLEALRKAVAADAAKALPFAVLGDFNVAPTDEDVWDPALFAGATHVTPAERAALA
ALEAEGLSEVLPRPLKYDRAYTFWDYRELRFPKNKGMRIDLTFGNAPFTAAVKDSYVDRE
ERKGKGASDHAPVVVDLEL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacctataacgtcaattcgatcaccgcccggctgccgaggctgctggcc
tggctggagagcagcggcaccgacgtgctgtgcgtccaggagaccaagtgcacggcggag
cagttccccaccgccgcgctcgccgagctcggctatgagtccgcggtcaacgccaccggc
cggtggaacggggtcgcgctgctctcccgcgtcggcctctccgacgtcgtcaccgggctg
cccgacggcccggagtacgacggggtgcaggagccgcgcgcgatcgcggcgacctgcggc
ccgctgcgcctctggtcggtctacgtgccgaacggccgcgaggtcgcgcacgagcactac
gcgtacaagctgcgctggctggaggccctgcggaaggccgtggcggcggacgccgcgaag
gccctgccgttcgcggtcctcggcgacttcaatgtggccccgaccgacgaggacgtctgg
gacccggcgctgttcgccggcgccacgcatgtgacgcccgccgagcgcgccgccctcgcg
gccctggaggcggagggcctgagcgaggtcctgccccgccccctcaagtacgaccgcgcc
tacaccttctgggactaccgcgagctgaggttccccaagaacaagggcatgcggatcgac
ctcaccttcggcaacgccccgttcaccgccgccgtcaaggacagctacgtcgaccgcgag
gagcgcaagggcaagggggcgtcggaccacgccccggtggtcgtcgacctcgaactctga
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