Streptomyces sp. VB1: OH133_06175
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Entry
OH133_06175 CDS
T11054
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
stvb Streptomyces sp. VB1
Pathway
stvb03030
DNA replication
stvb03430
Mismatch repair
stvb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OH133_06175
03430 Mismatch repair
OH133_06175
03440 Homologous recombination
OH133_06175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stvb03032
]
OH133_06175
03400 DNA repair and recombination proteins [BR:
stvb03400
]
OH133_06175
Enzymes [BR:
stvb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OH133_06175
DNA replication proteins [BR:
stvb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OH133_06175
DNA repair and recombination proteins [BR:
stvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OH133_06175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UZI27747
LinkDB
All DBs
Position
complement(1414222..1414932)
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AA seq
236 aa
AA seq
DB search
MSWHRGTLVGFDLETTGTDVENDRIVTAALVRLDADGTVAEQRTWLLDPGVAIPEQASAI
HGIGTDHARKHGSRAAPAVEEIAHAVAEVLRSGVPLVVMNARYDLSLLDRECRRHGLPSV
DERVGGAPSPVIDPLVIDKHVDKYRKGKRALQALCDHYGVTLDGAHEASADAVAAVRVVR
RMGERHRPVGTLPPAELHALQIRAAAEQSASLQAYLRRSDPAAVVEASWPVIPRSR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagctggcaccggggaacactggtcggcttcgacctggagacgacggggaccgacgtc
gagaacgaccgcatcgtcaccgccgcactggtccggctggacgcggacgggacggtcgcc
gagcagcggacctggctgctcgacccgggggtggcgatacccgaacaggcctccgcgatc
cacggcatcggcaccgaccacgcccgcaagcacgggtcgcgggccgccccggcggtcgag
gagatcgcccacgcggtcgccgaggtgctgcgctcgggcgtcccgctggtggtgatgaac
gcccgctacgacctctcgctgctggaccgcgagtgccgcaggcacgggctgccgtcggtc
gacgagcgggtcggcggcgcgccctcgcccgtcatcgacccgctggtgatcgacaagcac
gtcgacaagtaccgcaagggcaagcgggccctccaagcgctctgcgaccactacggggtc
acgctcgacggagcccacgaggcgagcgccgacgcggtggccgccgtacgcgtggtgcgc
cggatgggagagcggcaccgccccgtcggcaccctgccgcccgccgaactgcacgccctt
cagatccgggcggccgccgagcagtcggcctcgctccaggcctacctccgccgctcggac
ccggcggccgtggtcgaggcgtcctggccggtgatcccgcgcagccgctga
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