Streptomyces sp. VB1: OH133_09140
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Entry
OH133_09140 CDS
T11054
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
stvb Streptomyces sp. VB1
Pathway
stvb00300
Lysine biosynthesis
stvb00470
D-Amino acid metabolism
stvb01100
Metabolic pathways
stvb01110
Biosynthesis of secondary metabolites
stvb01120
Microbial metabolism in diverse environments
stvb01230
Biosynthesis of amino acids
Module
stvb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OH133_09140 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OH133_09140 (dapF)
Enzymes [BR:
stvb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
OH133_09140 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UZI28278
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Position
complement(2074162..2075028)
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AA seq
288 aa
AA seq
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MSTSQIAFLKGHGTENDFVIVPDPDNALSLPAAVVARLCDRRAGIGGDGLLHVVRSAAHP
EAHSMADAAEWFMDYRNADGSIAEMCGNGVRVFAHYLQRAGLVEEGDLTVATRGGPKRVH
LAKNGDITVSMGRALLPEESVTVSVGDRSWPARNVNMGNPHAVAFVDDLDHAGDLFTAPP
VSPGAVYPDGVNVEFVVDRGPGHVAMRVHERGSGETRSCGTGACAVAVATARRDGADPEK
TGLPATYRVDLPGGTLVITEHPDGAIDMTGPAVIVAEGVIDPAWLETS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacctcgcagatcgccttcctcaagggtcacggcaccgagaacgacttcgtgatc
gtcccggacccggacaacgccctctcgctgcccgccgccgtcgtcgcccggctctgcgac
cgccgggccggcatcggcggggacggcctgctgcacgtcgtgcggtcggccgcacacccc
gaggcgcactccatggcggacgcggccgagtggttcatggactaccgcaacgcggacggc
tcgatcgccgagatgtgcggtaatggcgtacgggtcttcgcccactacctccagcgcgcc
ggcctcgtcgaggagggcgacctcaccgtcgccacccggggcggccccaagcgcgtgcac
ctcgcgaagaacggcgacatcacggtctccatgggacgcgccctgctgcccgaggagagc
gtcacggtcagcgtcggcgaccgcagctggcccgcccgcaacgtcaacatgggcaacccg
cacgcggtcgccttcgtcgacgacctcgaccacgccggcgacctgttcaccgccccgccc
gtcagccccggcgccgtctaccccgacggcgtcaacgtcgagttcgtcgtcgaccgggga
ccgggccacgtcgccatgcgcgtccacgagcgcggctccggtgagacccgctcctgcggc
accggcgcctgcgcggtcgccgtcgccaccgcccgccgggacggcgccgaccccgagaag
accggcctccccgccacctaccgggtggacctccccggcggcaccctcgtcatcaccgag
caccccgacggcgcgatcgacatgaccgggcccgcggtgatcgtcgccgagggcgtcatc
gacccggcctggctcgaaacctcctga
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