Streptomyces sp. VB1: OH133_09350 Help Entry OH133_09350       CDS       T11054                                  Name (GenBank) HAMP domain-containing protein Organism stvb  Streptomyces sp. VB1 SSDB OrthologParalogGFIT Motif Pfam:  HAMP HAMP_2 HATPase_c Response_reg HisKA GAF_2 GAF ATG17_like DUF4795 RNase_Y_N Nup49_C GAF_3 Med21 ATG14 Motif Other DBs NCBI-ProteinID:  UZI28318 LinkDB All DBs Position complement(2119465..2124933) Genome browser AA seq 1822 aa AA seqDB search MKKQRNGTVEVDAAALNRLLAGLVAMRDGNFRRRLTVSGDGVMTEISAVFNEVADRNLHL TGELARVRRVVGREGKLTERLETGACEGSWAAAIDASNELVDDLARPVSEVGRVLSAVAD GDLEQRMELRSHTTDETVRPLRGEFLKVARTVNNLVDQLSVFTEQVTRVAVEVGTEGKLG GQAQVRGMSGSWKDLTDSVNTMAYRLTAQVRDIALVTTAVAKGDLSRKVTVHVAGEMLQL KNTVNTMVDQLSSFSSEVTRVAREVGTEGELGGQATVPGVAGVWKDLTDSVNTMAGNLTS QVRGIAEVTTAVASGDLTQKVTVSARGEVAQLAETINQMTETLRTFADEVTRVASEVGGE GLLGGQAQVPGAAGTWKDLTDSVNTVFRNLTTQVRDIAQVTTAVASGDMSQKVTVDVAGE MLELKNTVNTMVDQLQSFGSEVTRVAREVGVEGRLGGQAEVPGAAGTWKDLTDSVNTAFR NLTGQVRDIAQVTTAVANGDLSQKVTVDVAGEMLELKNTVNTMVAQLSSFADQVTRMARD VGTEGRLGGQARVDGVSGTWKELTDSVNFMAGNLTSQVRQIAQVTTAVARGDLSQKIDVD ARGEILELKNTINTMVDQLSAFADQVTRVAREVGTDGRLGGQAQVPGVAGVWRDLTDSVN GMAGNLTAQVRNIAQVATAVARGDLSQKIDVDARGEILELKNTLNTMVDQLSNFAEQVTR VAREVGTEGILGGQAEVQGVSGTWKDLTQSVNGMANNLTLQVRNIAEVTTAVAKGDLSKK ITVDAKGEILELVTTVNTMVDQLLNFADEVTRVAREVGTEGILGGQARVRGATGIWKDLS ENVNLMANNLTSQVRNISRVSSAVANGDLTKKVTVEARGEVAELADTVNTMVTTLSSFAD EVTRVAREVGTEGELGGQARVPGVAGTWKDLTESVNSMASNLTGQVRQIATVTTAIAKGD LTKKIDIDARGEIQELKNTINTMVDQLSSFAEQVTRVAREVGTEGQLGGQARVRDVDGTW RDLTESVNEMAGNLTRQVRAIAAVATAVTRGDLNLKIDVDAAGEIQVLQDNINTMIANLR DTTLANKEQDWLKGNLARISGLMQGRRDLDDVASLIMSELTPVVSAQHGAFFLAMTAGDS DEVGPDDGAASAYELRMRGSYGYSAGSMPTSFRPGETLIGTAAEEKRTIQVDNVPPGYLK ISSGLGEAPPAHVIVLPVLFEGKVLGVIELASFQPFTHIQRDFLNQLAEMIATSVNTISV NTKTEKLLEQSQELTEQLRDRSQELENRQKALQASNAELEEKAELLAQQNRDIEVKNTEI EEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLLILAKLLADNAEGNLSPKQVE FAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALVQLVDYVEATFRPLTAEKGLD FSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDGGAVELVIRPAGADVPNAIREHLL EAGSLRDADADLIAFSVTDTGIGIASSKMLVIFEAFKQADGTTSRKYGGTGLGLSISREI ARLLGGEIHAASEPGRGSTFTLYLPLHRAELPPQGYPAVGSGSAEVLGGAGEMGHVQAPQ GQPAPFGDPANSAGMFRRRRKALGDAAGRPALPTGRTTPESPPQQEEWVQTQGSHGESQA QSQPAAEGEREPRRTFRFRGEKVLIVDDDIRNVFALTSVLEQHGLAVLYAENGREGIEVL EQHDDVTVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIVALTAKAMKGDREKAIDCGASD YVTKPVDPDHLLAVMEQWMHGE NT seq 5469 nt NT seq  +upstreamnt  +downstreamnt gtgaaaaaacagcgcaatggcaccgtcgaggtcgacgcggcagctctgaacagactgctt gcggggctcgtggcgatgcgcgacggcaacttccgccggcggctcaccgtctccggcgac ggtgtgatgacggagatctccgcggtcttcaacgaggtcgccgaccggaaccttcatctc accggtgagctggcccgcgtacggcgcgtggtcggccgggaggggaagctcacggagcgg ctggagacgggcgcctgcgagggttcctgggccgcagcgatcgacgcctccaacgagctc gtcgacgatctcgcgcgaccggtctccgaagtgggccgggtgctgtcggcggtcgccgac ggtgatctggagcagcggatggagctgcggtcgcacacgacggacgagacggtccggccg ctgcgcggcgagttcctgaaggtcgcccgtacggtcaacaacctggtcgaccagctgtcg gtcttcaccgagcaggtgacccgggtcgccgtcgaggtgggcaccgagggcaagctcggg ggccaggcgcaggtgcgcgggatgtccgggtcctggaaggacctcacggactccgtgaac accatggcgtaccggctgacggcccaggtgcgggacatcgcgctggtgacgacggcggtc gccaagggtgatctgtcgcggaaggtcaccgtccatgtggccggtgagatgctccagctg aagaacaccgtcaacacgatggtcgatcagctgtcctcgttctcctccgaggtgacacgc gtcgcccgtgaggtgggtacggagggcgagctgggcggtcaggcgaccgtgccgggtgtg gcaggcgtctggaaggacctcaccgactccgtcaacacgatggcgggcaacctcacctcc caggtgcgcgggatcgcggaggtgacgacggcggtcgccagcggtgacctgacgcagaag gtcacggtgagcgcacgcggcgaggtcgcgcagctggccgagacgatcaaccagatgacc gagacgctgcgcaccttcgcggacgaagtgacgcgggtggcgagcgaggtcggtggcgag gggctgctcggcggtcaggcgcaggtgccgggcgcggccgggacctggaaggacctcacc gactcggtgaacacggtcttccggaacctgacgacccaggtgcgcgacatcgcgcaggtc accacggcggtggccagcggcgacatgtcgcagaaggtcacggtcgacgtggccggggag atgctggagctgaagaacaccgtcaacacgatggtggaccagctccagtcgttcggttcc gaggtgacccgggtggcccgggaggtcggcgtcgaggggcggctcgggggccaggccgag gtgccgggggccgcggggacgtggaaggacctcaccgactcggtgaacaccgcgttccgc aacctgaccggtcaggtccgggacatcgcgcaggtcaccacagcggtcgcgaacggtgat ctgtcgcagaaggtcaccgtggacgtggccggggagatgctggagctgaagaacaccgtc aacacgatggtggcgcagctgtccagcttcgccgaccaggtgacgcggatggcccgggac gtgggcaccgagggccgcctcggcggtcaggcgcgcgtggacggtgtgtcgggtacgtgg aaggaactcacggactccgtcaacttcatggccggcaacctcacctcccaggtgaggcag atcgcgcaggtgacgacggcggtggcgcggggcgacctgtcgcagaagatcgacgtggac gcccggggcgagatcctggagctgaagaacaccatcaacacgatggtcgaccagctctcc gccttcgccgaccaggtcaccagggtggcccgtgaggtgggtacggacgggcgtctgggc ggtcaggcgcaggtgcccggcgtggccggagtgtggcgcgatctcaccgattcggtgaac ggtatggccggaaacctcaccgctcaggtccgtaacatcgcgcaggtcgccacggcggtg gcgcgcggtgacctgtcgcagaagatcgacgtggacgcccggggcgagatcctggagctg aagaacaccctcaacacgatggtggaccagctgtccaacttcgcggagcaggtgacgcgg gtcgcccgtgaggtgggtacggaaggcatcctcggcggtcaggccgaggtgcagggcgtg tccggtacgtggaaggacctcacccagtccgtcaacggcatggcgaacaacctgaccctc caggtccgcaacatcgccgaggtcaccaccgcggtcgccaagggcgatctctccaagaag atcaccgtcgacgccaagggcgagatcctcgaactggtcacgaccgtcaacacgatggtc gaccagctgctgaacttcgcggacgaggtcacgcgcgtggcccgcgaggtgggtaccgag ggcatcctcggcgggcaggcgcgggtgcgcggggcgaccggcatctggaaggacctcagc gagaacgtcaacctgatggccaacaacctgaccagccaggtgcgcaacatctccagggtc tcctcggctgtcgccaacggcgatctgacgaagaaggtcaccgtggaggcgcgcggcgag gtcgcggagctggccgacaccgtcaacacgatggtgacgacgctgtcctcgttcgccgac gaggtcacgcgcgtggcccgcgaggtgggtacggaaggtgagctgggcggtcaggcgcgg gtgccgggagtcgccggtacgtggaaggacctcaccgagtccgtgaactcgatggcctcc aatctgaccggccaggtgcggcagatcgccacggtcaccaccgccatcgccaagggcgac ctgaccaagaagatcgacatcgacgcgcgcggtgagatccaagagctgaagaacaccatc aacacgatggtcgaccagctgtcctcgttcgcggagcaggtgacccgggtcgcccgcgag gtgggcaccgaggggcagctgggcggtcaggcacgggtgcgggacgtcgacggcacctgg cgcgacctcaccgagtcggtgaacgagatggccgggaacctgacccgtcaggtccgcgcc atcgcggccgtcgccaccgcggtgacccgcggcgatctgaacctgaagatcgacgtggac gcggccggcgagatccaggtcctccaggacaacatcaacacgatgatcgcgaatctgcgc gacaccaccctcgccaacaaggaacaggactggctgaagggcaacctggcgcggatctcc ggcctgatgcagggccgccgcgatctggacgacgtggcctcgctgatcatgagcgagctg acaccggtggtctcggcgcagcacggcgcgttcttcctggccatgaccgcgggcgactcg gacgaggtgggtccggacgatggtgcggccagcgcgtacgagctgcggatgcgggggagt tacggctactccgcgggttcgatgccgacctccttccggcccggggagacgctcatcggg acggcggccgaggagaagcggacgatccaggtggacaacgtgccgccgggctatctgaag atctcctcgggactgggagaggctcctccggcgcatgtgatcgtgttgccggtgctcttc gagggcaaggtcctcggcgtgatcgaactggcctccttccagccgttcacgcatatccag cgggacttcctcaaccagctcgccgagatgatcgcgacgagcgtcaacacgatcagcgtc aacaccaagaccgagaagctcctggagcagtcgcaggagctgaccgagcaactgcgggac cgctcgcaggagttggagaaccggcagaaggcccttcaggcgtccaacgccgaactggag gagaaggccgagctgctggcccagcagaaccgcgacatcgaggtgaagaacaccgagatc gaggaggcgcggcaggtgctggaggagcgggccgagcagctcgcggtctcgatgcgctac aagtccgagttcctggcgaacatgtcgcacgagctgcgtacgccgctgaactcgctgctg atcctcgccaagctgctggcggacaacgccgagggcaacctctcgccgaagcaggtggag ttcgccgagacgattcacggggccggttccgacctgctccagctgatcaacgacatcctc gacctgtcgaaggtcgaggcgggcaagatggacgtcagcccgaccaggatcgcgctggtc cagctggtcgactacgtggaggcgaccttccgcccgctcaccgcggagaaggggctcgac ttctccgtacgggtgtcgccggagcttcccgcgacgctgcacaccgacgagcagcgcctg ctgcaggtgctgcgcaacctgctctccaacgcggtgaagttcaccgacggcggtgcggtg gagctggtgatccggccggccggcgccgatgtgcccaacgcgatccgggagcacctgctg gaggccggttcgctgcgggacgccgacgccgatctgatcgccttctcggtcaccgacacc ggcatcgggatcgcgtccagcaagatgctggtgatcttcgaggcgttcaagcaggcggac ggcacgacgagccggaagtacggcggcaccggcctcggtctctcgatcagccgggagatc gcacggctgctcggcggcgagatccacgcggcgagcgagccgggacgcggttccaccttc accctgtacctgccgctgcaccgggccgaactgccgccccagggctaccccgcggtgggt tccggttccgccgaggtgttgggcggcgcgggcgagatggggcacgtccaggccccgcag ggccagccggctccgttcggcgacccggccaactccgccgggatgttccggcggcggcgc aaggccctgggagacgcggccggcaggcccgcgctgcccaccggccggaccactcccgag agccctccgcagcaggaggagtgggtgcagacgcaggggagccacggcgagagccaggcg cagagccagccggcggcggagggggagagggagccccggcggacgttccgcttccgcggt gagaaggtcctcatcgtcgacgacgacatccgcaacgtcttcgccctcaccagcgtgctg gagcagcacggactggcggtgctgtacgcggagaacggccgtgagggcatcgaagtcctg gagcagcacgacgatgtgacggtcgtgctgatggacatcatgatgcccgagatggacggt tacgcgacgacgaccgcaatccgtcggatgccgcagttcgccgggttgccgatcgtcgcg ctcaccgcgaaggccatgaagggcgaccgggagaaggccatcgattgcggggcttccgac tatgtgacgaagccggtcgatcctgatcacttgcttgcggtgatggagcagtggatgcac ggagagtga

DBGET integrated database retrieval system