KEGG   Streptomyces sp. VB1: OH133_10095
Entry
OH133_10095       CDS       T11054                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
stvb  Streptomyces sp. VB1
Brite
KEGG Orthology (KO) [BR:stvb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stvb03032]
    OH133_10095
   03036 Chromosome and associated proteins [BR:stvb03036]
    OH133_10095
   03400 DNA repair and recombination proteins [BR:stvb03400]
    OH133_10095
DNA replication proteins [BR:stvb03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    OH133_10095
Chromosome and associated proteins [BR:stvb03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    OH133_10095
DNA repair and recombination proteins [BR:stvb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      OH133_10095
SSDB
Motif
Pfam: Bac_DNA_binding HC2 DUF4813
Other DBs
NCBI-ProteinID: UZI28452
LinkDB
Position
complement(2296785..2297456)
AA seq 223 aa
MNKAQLVEAIADKVGGRQQAADAVDAVLDAIVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGSLSGGSSAARTTV
KAAAAKKSAAKKATAKKTTAKKATPAKTTAAAKKVTAKKTTATAKKASAAAKKATPAKKA
ATTAKKASPSKTAPAKKTTAKKAPAKKTTARTTTAKKATARKK
NT seq 672 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggcggccgtcagcaggcc
gcagacgctgtcgacgcggtactcgacgcgatcgtccgtgccgttgtcgcaggggaccgt
gtatcggtcaccggcttcggctcgttcgagaaggtcgaccgccccgcccggtacgcccgc
aacccgcagacgggtgagcgcgtccgggtcaagaagacctcggtgccccgcttccgtgcg
ggccagggtttcaaggacctggtgagcggctcgaagaagctccccaagaacgacgtggcc
gtcaagaaggcccccaagggcagcctctcgggcggatcctccgccgcccgtacgacggtg
aaggccgccgccgccaagaagtcggccgccaagaaggccaccgcgaagaagaccaccgcc
aagaaggcgactccggcgaagaccactgccgcagccaagaaggtcaccgcgaagaagacc
accgcgacggccaagaaggcctctgcggccgccaagaaggcgactccggcgaagaaggcc
gcgacgaccgccaagaaggcctcgcccagcaagaccgcgcccgccaagaagaccacggcg
aagaaggcgcccgccaagaagaccacggcgcgcaccaccacggccaagaaggccaccgca
cgcaagaagtga

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