Streptomyces sp. VB1: OH133_10095
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Entry
OH133_10095 CDS
T11054
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
stvb Streptomyces sp. VB1
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stvb03032
]
OH133_10095
03036 Chromosome and associated proteins [BR:
stvb03036
]
OH133_10095
03400 DNA repair and recombination proteins [BR:
stvb03400
]
OH133_10095
DNA replication proteins [BR:
stvb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OH133_10095
Chromosome and associated proteins [BR:
stvb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OH133_10095
DNA repair and recombination proteins [BR:
stvb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OH133_10095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
DUF4813
Motif
Other DBs
NCBI-ProteinID:
UZI28452
LinkDB
All DBs
Position
complement(2296785..2297456)
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AA seq
223 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAADAVDAVLDAIVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGSLSGGSSAARTTV
KAAAAKKSAAKKATAKKTTAKKATPAKTTAAAKKVTAKKTTATAKKASAAAKKATPAKKA
ATTAKKASPSKTAPAKKTTAKKAPAKKTTARTTTAKKATARKK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggcggccgtcagcaggcc
gcagacgctgtcgacgcggtactcgacgcgatcgtccgtgccgttgtcgcaggggaccgt
gtatcggtcaccggcttcggctcgttcgagaaggtcgaccgccccgcccggtacgcccgc
aacccgcagacgggtgagcgcgtccgggtcaagaagacctcggtgccccgcttccgtgcg
ggccagggtttcaaggacctggtgagcggctcgaagaagctccccaagaacgacgtggcc
gtcaagaaggcccccaagggcagcctctcgggcggatcctccgccgcccgtacgacggtg
aaggccgccgccgccaagaagtcggccgccaagaaggccaccgcgaagaagaccaccgcc
aagaaggcgactccggcgaagaccactgccgcagccaagaaggtcaccgcgaagaagacc
accgcgacggccaagaaggcctctgcggccgccaagaaggcgactccggcgaagaaggcc
gcgacgaccgccaagaaggcctcgcccagcaagaccgcgcccgccaagaagaccacggcg
aagaaggcgcccgccaagaagaccacggcgcgcaccaccacggccaagaaggccaccgca
cgcaagaagtga
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