KEGG   Streptomyces sp. VB1: OH133_11660
Entry
OH133_11660       CDS       T11054                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
stvb  Streptomyces sp. VB1
Pathway
stvb03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:stvb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    OH133_11660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stvb03400]
    OH133_11660
DNA repair and recombination proteins [BR:stvb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     OH133_11660
SSDB
Motif
Pfam: Ku HC2 DUF2149
Other DBs
NCBI-ProteinID: UZI28733
LinkDB
Position
complement(2647065..2648243)
AA seq 392 aa
MRSIWNGAISFGLVSIPIKLINATENHSISFRQIHLADGGRIRYRKVCELDEEEVSGGEI
GKAYEDADGTMIPITDEDLAQLPLPTAKTIEIVAFVPADRIDPLQMDAAYYLSANGVPAA
KPYTLLREALKHSNRVAVAKYALRGRERLGMLRVVDDVIAMHGLLWPDEIRPPQDAAPDG
DVTIRDAELDLADTLMDTLGEVDMDSLHDDYREAVEELVAAKASGESVLPAEPEDAGGGK
VIDLIAALENSVRAARKSQHDEGEGAGDGGSGGDMADVHPIKKTPSKASGKTAQKTTEAA
QKTTEAAEKTTHRTPTGKTVTRSGSSTTKKSAPKSTGAKKSTARKSTAKESTPRKPTAKK
SDAKKPAAKKRTSSSGGPAAKKTASSRKRTSA
NT seq 1179 nt   +upstreamnt  +downstreamnt
gtgaggtccatatggaacggtgcgatctccttcgggctggtcagcatcccgatcaaactg
atcaacgccaccgagaaccactcgatcagcttccggcagatccacctcgccgacggtggc
cggatccggtaccgcaaggtctgtgaactggacgaggaggaggtctccggcggcgagata
ggcaaggcgtacgaggacgccgacggcacgatgatcccgatcaccgacgaggatctcgcc
cagctcccgctgccgacggcgaagacgatcgagatcgtcgccttcgtgcccgccgaccgg
atcgacccccttcagatggacgcggcgtactacctctccgccaacggagtcccggccgcc
aagccgtacaccctgctccgcgaggccctcaagcacagcaacagggtcgccgtcgccaag
tacgccctgcgcggccgcgaacggctcggcatgctccgcgtcgtggacgatgtgatcgcc
atgcacggcctcctgtggcccgacgagatccgccccccgcaggacgcggctcctgacggc
gacgtcacgatccgcgacgccgaactcgacctggcggacaccctgatggacaccctcggc
gaggtcgacatggacagcctccacgacgactaccgggaggcggtggaggaactcgtcgcc
gcgaaggcatccggcgagagcgtgctcccggccgaacccgaggacgccggcggcggcaag
gtcatcgacctgatcgcggccctggagaacagcgtgcgggcggccaggaaatcccagcac
gacgagggtgagggcgcgggcgacggcggcagcggtggggacatggccgacgtccacccc
atcaagaagacgccgtcgaaggcgtccgggaagaccgcgcagaagaccaccgaagccgcg
cagaagaccaccgaagccgcggagaagaccacccaccgcaccccgaccggcaagacggtc
acccgctccggaagctccacgacgaagaagtccgctcccaagtccaccggcgcgaagaag
tccacggcgaggaagtccacggcgaaggagtccaccccgaggaagcccacggcgaagaag
tccgatgccaagaagcccgctgcgaagaagcggacgtcgtcgagcggcggcccggcggcg
aagaagacggcgtcctcccgcaaacgcacctcggcctga

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