Streptomyces sp. VB1: OH133_11660
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Entry
OH133_11660 CDS
T11054
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
stvb Streptomyces sp. VB1
Pathway
stvb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
OH133_11660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stvb03400
]
OH133_11660
DNA repair and recombination proteins [BR:
stvb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
OH133_11660
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
HC2
DUF2149
Motif
Other DBs
NCBI-ProteinID:
UZI28733
LinkDB
All DBs
Position
complement(2647065..2648243)
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AA seq
392 aa
AA seq
DB search
MRSIWNGAISFGLVSIPIKLINATENHSISFRQIHLADGGRIRYRKVCELDEEEVSGGEI
GKAYEDADGTMIPITDEDLAQLPLPTAKTIEIVAFVPADRIDPLQMDAAYYLSANGVPAA
KPYTLLREALKHSNRVAVAKYALRGRERLGMLRVVDDVIAMHGLLWPDEIRPPQDAAPDG
DVTIRDAELDLADTLMDTLGEVDMDSLHDDYREAVEELVAAKASGESVLPAEPEDAGGGK
VIDLIAALENSVRAARKSQHDEGEGAGDGGSGGDMADVHPIKKTPSKASGKTAQKTTEAA
QKTTEAAEKTTHRTPTGKTVTRSGSSTTKKSAPKSTGAKKSTARKSTAKESTPRKPTAKK
SDAKKPAAKKRTSSSGGPAAKKTASSRKRTSA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtccatatggaacggtgcgatctccttcgggctggtcagcatcccgatcaaactg
atcaacgccaccgagaaccactcgatcagcttccggcagatccacctcgccgacggtggc
cggatccggtaccgcaaggtctgtgaactggacgaggaggaggtctccggcggcgagata
ggcaaggcgtacgaggacgccgacggcacgatgatcccgatcaccgacgaggatctcgcc
cagctcccgctgccgacggcgaagacgatcgagatcgtcgccttcgtgcccgccgaccgg
atcgacccccttcagatggacgcggcgtactacctctccgccaacggagtcccggccgcc
aagccgtacaccctgctccgcgaggccctcaagcacagcaacagggtcgccgtcgccaag
tacgccctgcgcggccgcgaacggctcggcatgctccgcgtcgtggacgatgtgatcgcc
atgcacggcctcctgtggcccgacgagatccgccccccgcaggacgcggctcctgacggc
gacgtcacgatccgcgacgccgaactcgacctggcggacaccctgatggacaccctcggc
gaggtcgacatggacagcctccacgacgactaccgggaggcggtggaggaactcgtcgcc
gcgaaggcatccggcgagagcgtgctcccggccgaacccgaggacgccggcggcggcaag
gtcatcgacctgatcgcggccctggagaacagcgtgcgggcggccaggaaatcccagcac
gacgagggtgagggcgcgggcgacggcggcagcggtggggacatggccgacgtccacccc
atcaagaagacgccgtcgaaggcgtccgggaagaccgcgcagaagaccaccgaagccgcg
cagaagaccaccgaagccgcggagaagaccacccaccgcaccccgaccggcaagacggtc
acccgctccggaagctccacgacgaagaagtccgctcccaagtccaccggcgcgaagaag
tccacggcgaggaagtccacggcgaaggagtccaccccgaggaagcccacggcgaagaag
tccgatgccaagaagcccgctgcgaagaagcggacgtcgtcgagcggcggcccggcggcg
aagaagacggcgtcctcccgcaaacgcacctcggcctga
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