Streptomyces sp. VB1: OH133_12395
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Entry
OH133_12395 CDS
T11054
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stvb Streptomyces sp. VB1
Pathway
stvb03420
Nucleotide excision repair
stvb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OH133_12395
03430 Mismatch repair
OH133_12395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stvb03400
]
OH133_12395
Enzymes [BR:
stvb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OH133_12395
DNA repair and recombination proteins [BR:
stvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OH133_12395
MMR (mismatch excision repair)
Other MMR factors
OH133_12395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
C1_1
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
UZI28865
LinkDB
All DBs
Position
complement(2801717..2803933)
Genome browser
AA seq
738 aa
AA seq
DB search
MTAATHSTLFPQVPETPDAVLDGLDPEQREVALALHGPVCVLAGAGTGKTRAITHRIAYG
VRAGILQPATVLAVTFTNRAAGEMRGRLRQLGATGVQARTFHSAALRQLQYFWPKAVGGE
LPRLLERKVQLVAEAAARCELRLDRNELRDVTSEIEWAKVTQTVPADYPAAVAKTQRDAP
RDPAVLSQIYSTYEQLKRDRSVIDFEDVLLLTVGILQDRSDIAEHVRGQYQHFVVDEYQD
VSPLQQRLLDLWVGDRDDLCVVGDASQTIYSFTGATPDHLLNFRTRHPGATVVKLVRDYR
STPQVVHLANGLLSQAHGKAADHRLELVSQRDKGPEPVYAEYSDEPTEAEGTARLIRDLV
AAGVPAGEIAVLYRVNSQSEVYEQALADAGVPYQLRGAERFFERAEVREAGTALRGAARA
GGNDSLLDGAEDLAAQVRAVLSTKGWTSRPPAGSGAVRDRWESLAALVRLAEDFETAKPG
ATLTDLVRELDERAAAQHAPTVQGVTLASLHSAKGLEWDAVFLVGLTEGMMPIAYAKTDE
QVEEERRLMYVGITRARVHLSLSWALSRSPGGRASRRPTRFLNGLRPGSTASGARSGAGG
VGGIDRGTGRSAVGRTPAVERKPRSPVRCRVCGRTLTDAGEMKLMRCEECPSDMDEALYG
RLYDWRAAQAALLGQPDFCVFTEKTLMAIAEAVPSTAGELVVIAGVGNRKLSRFGTDVLA
ICAGEAMDGESEEGADET
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacgcactccaccctcttccctcaggtccccgagaccccggacgccgtg
ctcgacgggctcgaccccgagcagcgcgaggtggctctggccctgcacggaccggtgtgc
gtgctggccggagccggtacgggcaagacccgcgcgatcacgcaccgcatcgcgtacggg
gtgcgtgcgggcatcctccagccggccaccgtgctcgccgtcaccttcaccaaccgggcc
gccggagagatgcgcggccgcctgcgccagctcggcgcgaccggcgtccaggcgcggacc
ttccactccgccgccctccgccagctccagtacttctggccgaaagcagtcggtggcgag
ctgccccggctgctggagcggaaggtgcagctggtcgccgaggccgccgcccgctgcgag
ctccggctcgaccgcaacgagctgcgggacgtcaccagcgagatcgagtgggccaaggtc
acccagaccgtccccgccgactatccggcggccgtcgccaagacccagcgggacgccccc
cgcgatccggcggtcctctcccagatctactccacgtacgaacagctcaagcgcgaccgc
tcggtgatcgacttcgaggacgtgctgctgctcaccgtcggcatcctccaggaccggagc
gacatcgccgagcacgtgcgcggccagtaccagcacttcgtcgtcgacgagtaccaggac
gtgagcccgctccagcagcggctgctcgacctctgggtcggggaccgggacgatctctgc
gtcgtcggcgacgccagccagacgatctactccttcaccggggccaccccggaccacctg
ttgaacttccgcacccgccaccccggggcgaccgtggtcaagctggtgcgggactaccgc
tccaccccccaggtcgtccacctcgccaacggcctgctgagccaggcccacggcaaggcg
gccgaccaccggctggagctggtctcgcagcgcgacaaggggcccgagcccgtctacgcg
gagtattccgacgagcccaccgaggccgagggcaccgcccggctgatccgcgatctcgtc
gccgcgggcgtgccggccggcgagatcgccgtcctctaccgcgtcaactcccagtccgag
gtctacgagcaggcactcgcggacgccggggtcccctaccagctgcgcggcgccgagcgg
ttcttcgagcgggccgaggtccgcgaggcgggcaccgccctgcgcggcgcggcccgcgcc
ggaggcaacgactcgctcctcgacggggcggaggacctggccgcccaggtgcgggcggtg
ctctccaccaagggctggaccagccggccgcccgccgggtcgggagccgtgcgcgaccgc
tgggagtcgctggccgcgctggtgcgcctcgcggaggacttcgagacggccaaaccgggg
gcgaccctgaccgacctggtccgggagctggacgagcgggcggctgcccagcacgccccg
acggtccagggggtgaccctggcctcgctgcactcggcgaagggcctggaatgggacgcc
gtgttcctggtcggcctcaccgagggcatgatgccgatcgcctacgccaagaccgacgag
caggtcgaggaggagcggcgcctgatgtatgtcggcatcacccgtgcccgcgtccacctc
tcgctctcctgggcgctgtcccggtcaccgggcggccgcgcgagccgacggccgacccgc
ttcctgaacgggctgcgcccgggctcgacggcctcgggcgcgcggagcggggccggcggc
gtcggagggatcgaccgggggaccggccggtccgccgtcgggcggaccccggccgtcgag
cgcaaacccaggagcccggtgcgctgccgggtctgcggacgcacgctcaccgacgcgggc
gagatgaagctgatgcgctgcgaggagtgcccctcggacatggacgaggcgctgtacggg
cggctgtacgactggcgcgccgcccaggcggccctgctggggcagccggacttctgcgtg
ttcaccgagaagacgctcatggcgatcgccgaggccgtgccgtccaccgcgggcgagctg
gtcgtcatcgccggcgtcggcaaccggaagctgagccgcttcggcaccgatgttctggcc
atctgcgcaggtgaggcgatggatggcgagtccgaggagggcgcggacgagacctga
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