Streptomyces sp. VB1: OH133_14140
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Entry
OH133_14140 CDS
T11054
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
stvb Streptomyces sp. VB1
Pathway
stvb00300
Lysine biosynthesis
stvb00470
D-Amino acid metabolism
stvb01100
Metabolic pathways
stvb01110
Biosynthesis of secondary metabolites
stvb01120
Microbial metabolism in diverse environments
stvb01230
Biosynthesis of amino acids
Module
stvb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OH133_14140 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OH133_14140 (lysA)
Enzymes [BR:
stvb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
OH133_14140 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UZI29188
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Position
complement(3185274..3186608)
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AA seq
444 aa
AA seq
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MSAPVLTEPPAGLDDLSVWPASTARLPGGDLSVGGVSLTGLADRFGTPAYVLDEDEVRSR
CRAYRAAFPEAQVLYAAKAFLSRAMARWIDEEGLGLDVCSVGELELAHAAGFPPERMVLH
GNAKTPRDIETALRLGAGRIVVDSPSEIARIAALTGPEGRQKVMVRVVPGVSAGGHEKIR
TGTDGQKFGLSLTDGSAQHAIARVLGQPQLELTGLHCHIGSQITDVKPYLVAVRRMVGLM
ARVKDSHGVTFPELDMGGGHGVAYRPGEPALDLTALARRLGAELATGCAAAGLPVPRLAI
EPGRAIAGPAGVALYRVLSVKHTGPNLFVAVDGGMSDNPRPALYGARYAPRLIGRAATAG
PVAATVVGRHCEAGDVLASDVLLPGDIRSGDLLAVPVAGAYQVSMASAYNLVGRPPVVAV
HEGTARLLIRRETQEDLRRRDIGA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctcccgttctcaccgagcccccggcaggactggacgacctgtccgtctggccc
gcctccaccgcccggctcccgggcggcgacctgagcgtcggaggcgtctcgctcaccggc
ctcgccgaccggttcggcactcccgcgtacgtcctggacgaggacgaggtgcgttcacgc
tgccgggcctaccgggccgccttccccgaggcccaggtgctgtacgcggccaaggcgttc
ctgtcccgggcgatggcgcggtggatcgacgaggagggcctggggctggacgtctgttcc
gtcggcgaactcgaactcgcccacgccgccgggttcccgccggagcggatggtgctgcac
ggcaacgcgaagacaccgcgcgacatcgagacggcgctacggctcggggccgggcggatc
gtcgtcgacagcccgtcggagatcgcccggatcgccgcgctgaccggccccgaggggcgg
cagaaggtgatggtgcgggtggtgcccggggtgtcggcgggcggccacgagaagatccgt
accggtaccgacggccagaagttcggcctgtccctcacggacgggtccgcccagcacgcc
atcgcccgtgtgctcggccagccgcagctcgaactgacgggcctgcactgccacataggc
tcgcagatcaccgacgtcaagccgtacctggtggccgtgcggcgcatggtcggactgatg
gcccgggtcaaggacagccacggcgtcaccttcccggagctcgacatgggcggcgggcac
ggggtggcctaccggccgggggagcccgccctcgacctgaccgccctcgcgcgccgcctc
ggcgcggaactcgccaccggctgtgcggcggcgggcctgcccgtgccgaggctggccatc
gaaccggggcgggcgatcgcgggcccggccggggtggcgctctaccgcgtcctctccgtc
aagcacaccggcccgaacctgttcgtggccgtcgacgggggaatgagcgacaacccccgg
cccgccctgtacggggcccgctacgcgccgcgcctgatcggccgtgccgccaccgccgga
ccggtcgcggccacggtggtgggccggcactgcgaggccggcgacgtcctcgcgagcgac
gtcctcctgcccggcgacatccgctccggcgacctgctcgcggtgcccgtggcaggggcc
taccaggtctccatggcctccgcctacaacctcgtcggccggccgccggtcgtcgcggtg
cacgaaggcacggcacgcctgctgatccggcgcgagacacaggaggacctccggcggcgc
gacatcggcgcctga
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