Streptomyces sp. VB1: OH133_14405
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Entry
OH133_14405 CDS
T11054
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stvb Streptomyces sp. VB1
Pathway
stvb03420
Nucleotide excision repair
stvb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OH133_14405 (pcrA)
03430 Mismatch repair
OH133_14405 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stvb03400
]
OH133_14405 (pcrA)
Enzymes [BR:
stvb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OH133_14405 (pcrA)
DNA repair and recombination proteins [BR:
stvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OH133_14405 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
OH133_14405 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
ResIII
DEAD
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UZI29234
LinkDB
All DBs
Position
complement(3243645..3246086)
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AA seq
813 aa
AA seq
DB search
MSSLFDDSFLTGLQSAEDGPPPPPEDHAPEAVPEGLFGGVYDAPPPPRDGYYRDGHARPV
IDSAALLDGLNTEQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAHLLAERGTHPGQILAI
TFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAADSK
RLMALVCRDLDLDPKQFPPKSFTAKVSNLKNELIDEETFAGQAADGFEKTLAQAYALYQA
RLREANALDFDDIIMTTVHLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYTLVRELVGP
AGEADAPAELCVVGDADQSIYAFRGATIRNILQFEEDYPSATTILLEQNYRSTQTILSAA
NAVIERNESRRPKNLWTNAGSGARITGYVADTEHDEAQFVADEIDRLTDAGDAKAGDVAV
FYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDTVPLRRILN
VPKRGIGDRAEAMIDALSMREKISFPQALRRVDEAYGMAARSSNAVKRFNTLMEELRTIV
ESGAGPAVVLEAVLERTGYLAELQASTDPQDETRVENLQELAAVALEFEQERGDEEGAGT
LAEFLEKVALVADSDQIPDEDEDGSGVITLMTLHTAKGLEFPVVFLTGMEDGVFPHMRAL
GQTKELEEERRLAYVGITRARERLYLTRAAMRSAWGQPSYNPPSRFLEEIPEAHLDWRRK
GPMAAPAGPTSGITSSLSSSRSRSGPSGFATRRGGAEKPTVTLVAGDRVTHDQFGLGTVT
AVEGFGDQAKATVDFGDERPKKLLLRYAPVEKL
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagtttcctgaccggcctccagtccgcggaggacggcccc
ccgccgcctcccgaggaccacgcgcccgaagcggtgccggagggactcttcggaggcgtc
tacgacgcgcccccgccgccccgggacgggtattaccgggacggtcacgcgcgcccggtg
atcgactccgccgcgctgctcgacgggctgaacaccgagcagcgcgccgccgtcgtgcac
gccgggtccccgctgctcatcgtcgccggggccggctccggcaagacccgggttctcacc
caccgcatcgcccacctgctggccgagcgcgggacgcaccccgggcagatcctcgcgatc
accttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctcgtcggcccc
cgcgccaacgccatgtgggtcatgaccttccacagcgcgtgcgtccgcatcctgcgccgc
gagtcgaagaagctcggcttcacctcgtcgttctcgatctacgacgccgccgactccaag
cggctgatggccctggtctgccgcgacctcgacctggacccgaagcagtttccgccgaag
tccttcaccgccaaggtctccaacctcaagaacgagctcatcgacgaggagaccttcgcc
ggacaggcggcggacggtttcgagaagaccctcgcccaggcgtacgcgctctaccaggcc
cgcctgcgcgaggccaacgccctggacttcgacgacatcatcatgacgacggtccacctg
ctccaggccttcccggacgtcgccgagcactaccgccgccgcttccgccacgtcctcgtc
gacgagtaccaggacaccaaccacgcccagtacacgctggtaagggagctggtcggcccg
gccggggaggccgacgcacccgccgagctgtgcgtggtgggcgacgcggaccagtcgatc
tacgccttccggggcgcgaccatccgcaacatcctccagttcgaggaggactacccgagc
gcgacgacgatcctgctggagcagaactaccgctccacgcagacgatcctctccgccgcc
aacgccgtcatcgagcgcaacgagagccgccgccccaagaacctctggaccaacgccggc
agcggcgcccgcatcaccggctacgtcgccgacaccgagcacgacgaggcgcagttcgtc
gccgacgagatcgaccggctcaccgacgcgggcgacgccaaggcgggcgacgtcgccgtc
ttctaccggaccaacgcccagtcccgtgtcttcgaagagatcttcatccgcgtcggcctg
ccctacaaggtcgtcggcggtgtgcgcttctacgagcgcaaggaggtccgggacgtcctg
gcctacctccgggtcctggccaaccccgaggacaccgtcccgctgcgccgcatcctcaac
gtccccaagcgcggcatcggcgaccgcgccgaagccatgatcgacgccctgtcgatgcgc
gagaagatctccttcccgcaggcactgcgccgcgtcgacgaggcgtacggcatggccgcc
cgctcgtccaacgccgtcaagcgcttcaacacgctgatggaggagctgcgcacgatcgtc
gagtccggcgcggggcccgccgtcgtgctggaagcggtcctggagcgtacgggctatctc
gccgagctccaggcctccaccgacccgcaggacgagacccgcgtcgagaacctccaggaa
ctcgccgccgtcgccctcgaattcgagcaggagcgcggcgacgaggaaggtgcgggcacg
ctcgcggagttcctggagaaggtcgcgctcgtcgccgactccgaccagatccccgacgag
gacgaggacggctccggcgtcatcacgctgatgaccctgcacacggcgaagggcctggag
ttcccggtcgtcttcctcaccggcatggaggacggcgtcttcccgcacatgcgggccctc
ggccagaccaaggagctggaggaggagcgccgtctcgcgtatgtcggcatcacccgcgcc
cgcgaacggctctacctgacccgggccgcgatgcgcagcgcctggggccagccctcgtac
aacccgccctcgcggttcctggaggagatcccggaagcgcacctggactggcggcgcaag
ggcccgatggccgcccccgccgggcccacctccggcatcacgtcctcgctgtcctcctcc
cgttcccgctcgggcccttcgggtttcgcgacccggcgtggcggcgcggagaagccgacg
gtcaccctggtggccggggaccgggtcacgcacgaccagttcgggctcggcacggtgacg
gccgtcgagggtttcggcgaccaggccaaggcgacggtcgacttcggcgacgaacgcccg
aagaagctgctgctgcggtacgcgccggtcgagaagctgtag
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