Streptomyces sp. VB1: OH133_15435
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Entry
OH133_15435 CDS
T11054
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
stvb Streptomyces sp. VB1
Pathway
stvb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OH133_15435 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stvb03019
]
OH133_15435 (recQ)
03400 DNA repair and recombination proteins [BR:
stvb03400
]
OH133_15435 (recQ)
Enzymes [BR:
stvb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OH133_15435 (recQ)
Messenger RNA biogenesis [BR:
stvb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OH133_15435 (recQ)
DNA repair and recombination proteins [BR:
stvb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OH133_15435 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
UZI33655
LinkDB
All DBs
Position
complement(3447016..3449109)
Genome browser
AA seq
697 aa
AA seq
DB search
MDVTGTVTDTDIDTGGEGETDTGGESEARRTLHRVFGYESFRGEQGAVIEHVVAGGDAVV
LMPTGGGKSLCYQIPSLVRRGTGVVVSPLIALMQDQVDALRALGVRAGFMNSTQDFDERR
SMEAQFLAGELDVLYLAPERLRLDSTLSLLARGEISVFAIDEAHCVAQWGHDFRPDYLAL
SVLGERWPDVPRIALTATATHATHEEITRRLGMPNAKHFVASFDRPNIQYRIVPKSEPKK
QLLTFLKEEHAGDAGIVYCLSRNSTEKIAEYLCRNGVEAVPYHAGLDAGTRATNQARFLR
EEGLVVVATIAFGMGIDKPDVRFVAHVDLPKSVEGYYQETGRAGRDGEPSTAWMAYGLQD
VVQQRKLIQGSEGDEAFRRRAASHLDSMLALCETVQCRRSQLLTYFGQEPTAPACGNCDT
CLTPPETWDGTVVSQKLLSTVVRLKRERNQKFGAGQIIDILLGRKTAKVIQFDHDQLSVF
GIGEDLAEAEWRGVVRQLLAQGLLAVEGEYGTLVLTDESATVLGRERDVLLRKEPKKPTS
RSSSSAGGAKGAKGKAAAADLPESAVPVFEALRAWRGATAKEQGVPAYVIFHDATLREIA
TLHPSSLAELGGVSGLGEKKLATYGEGVLEVLAQTSPGAAAEVPAPAVPAPAPAAPAPVP
ASRPAAAPARTQAPAAVPAPQHSDPEFGWDEEPPEYE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaccgggacggtgaccgacaccgacatcgacacgggcggcgagggcgagacc
gacacgggcggcgagagcgaggcgcggcggacactgcaccgcgtcttcgggtacgagtcg
ttccgcggcgagcagggcgcggtcatcgagcatgtggtggcgggcggcgacgcggtcgtg
ctcatgcccaccggcgggggaaagtccctctgctaccagatcccgtccctggtcaggcgg
ggcaccggcgtcgtcgtctccccgctgatcgccctcatgcaggatcaggtcgacgccctg
cgggcgctcggcgtccgggccggcttcatgaactccacgcaggacttcgacgagcgccgc
tcgatggaggcgcagttcctcgcgggcgagctggacgtgctctacctcgcgccggagcgg
ctgcgcctggactccaccctctccctgctggcccggggcgagatctccgtcttcgcgatc
gacgaggcgcactgtgtcgcccagtggggccacgacttccgccccgactatctggccctg
tccgtgctcggcgagcgctggccggacgttccgcgcatcgctctgacggcgaccgcgacc
cacgccacgcacgaggagatcacccgccgcctcggcatgccgaacgcgaagcacttcgtc
gcgagcttcgaccggccgaacatccagtaccggatcgtgccgaagtccgagcccaagaag
cagctcctcaccttcctcaaggaggagcacgccggggacgcgggcatcgtctactgcctc
tcgcgcaactccaccgagaagatcgcggagtacctctgtcgcaacggcgtggaggccgtg
ccgtaccacgcgggcctggacgccgggacccgcgccaccaaccaggcgcgcttcctccgc
gaggaggggctcgtcgtcgtcgcgacgatcgcgttcggcatgggcatcgacaagccggac
gtccgcttcgtcgcccacgtcgacctccccaagtccgtcgaggggtactaccaggagacc
ggccgcgcgggccgtgacggggagccgtcgacggcctggatggcgtacgggctccaggac
gtcgtccagcagcgcaagctcatccagggcagcgagggcgacgaggcgttccgccgccgg
gccgcctctcatctggactcgatgctggccctgtgcgagacggtgcaatgccgccggtcg
cagctgctgacctacttcggccaggagcccacggcccccgcctgcggcaactgcgacacc
tgcctgactccgccggagacctgggacggcacggtcgtctcgcagaagctgctctccacg
gtggtgcggctgaagcgggaacggaaccagaagttcggcgcgggccagatcatcgacatc
ctgctgggccgcaagaccgccaaggtcatccagttcgaccacgaccagctctccgtcttc
ggcatcggcgaggacctggcggaggcggagtggcgcggtgtggtgcgccagctgctggcc
caggggctgctcgcggtcgagggggagtacggcacgctggtcctcaccgacgagagcgcg
acggtcctgggtcgggagcgggacgtgctgctccgcaaggagccgaagaagccgacatcc
cggtcgtcgtcgtccgccggtggagccaagggcgccaagggcaaggcggccgccgccgat
ctgcccgagtccgcggtcccggtcttcgaggcgctgcgcgcctggcgcggggcgacggcg
aaggagcagggcgttccggcgtacgtcatcttccacgacgccacgctgcgcgagatcgcg
acgctgcacccgagctccctcgcggagctgggcggcgtcagcggcctgggcgagaagaag
ctcgcgacgtacggggagggcgtgctggaggtcctggcgcagacgtccccgggggcggcg
gcggaggttcccgcaccggccgtcccggctcccgcaccggcggccccggctcccgtgccc
gcgtcgcgcccggcggcggccccggcccgcacacaggccccggccgcggtcccggccccg
cagcacagcgaccccgagttcggctgggacgaggaaccgcccgagtacgagtga
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