Streptomyces sp. VB1: OH133_18790
Help
Entry
OH133_18790 CDS
T11054
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stvb Streptomyces sp. VB1
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stvb03021
]
OH133_18790
Transcription machinery [BR:
stvb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OH133_18790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
HTH_24
Sigma70_ECF
PF0610-like_N
MarR
DUF7343
KORA
DUF134
Motif
Other DBs
NCBI-ProteinID:
UZI30006
LinkDB
All DBs
Position
4133093..4133959
Genome browser
AA seq
288 aa
AA seq
DB search
MSEEQGSSKVLTLTKSVPAPAVLTSSPEAIDTRTLSRSLFLRLAALGPASGPEGTDSPER
TYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAM
PTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKTSDELAQKLDRSPTVPELARALGVSEE
DVVDGLAVGNAYTASSLDSPSPEDDGGEGSLADRLGYEDAALEGVEYRESLKPLLAKLAP
RERQIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLIAD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaacagggcagctcgaaggtgctcacgctcacgaagagcgtgccggcaccc
gccgtgctcaccagctcgccggaagccatcgacacccgtacgctgtcccgctccctgttc
ctgcggctcgccgcgctcggccccgcctcgggccccgagggaacggacagtccggagcgg
acctacgtgcgggacacactgatcgaactgaacctcccgctggtgcggtacgccgcggcc
cggttccgcagccgcaacgaaccgatggaggacatcgtccaggtcggcacgatcggcctg
atcaaggcgatcgaccgcttcgactgcgaacggggcgtcgagttccccacgttcgcgatg
cccaccgtcgtcggcgagatcaagcgcttcttccgcgacacctcctggtccgtgcgggtc
ccccgccgcctccaggagctgcggctcgccctgaccaagaccagcgacgagctcgcgcag
aagctcgaccgctcgccgaccgtgccggagctggcccgcgcgctcggggtctccgaggag
gacgtggtcgacggtctcgccgtcggcaacgcctacaccgcctcctccctggactccccc
tcccccgaggacgacggcggagagggctccctcgccgaccgcctcgggtacgaggacgcg
gcgctggagggcgtcgagtaccgcgagtcgctcaagccgctgctggccaagctcgccccg
cgcgagcgccagatcatcatgctgcggttcttcgcgaacatgacgcagtcgcagatcggc
gaggaggtcggcatctcccagatgcacgtctcccggctgctgacccgcacactcgcgcag
ctcagggaagggctcatcgcggactga
DBGET
integrated database retrieval system
