Streptomyces sp. VB1: OH133_19170
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Entry
OH133_19170 CDS
T11054
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
stvb Streptomyces sp. VB1
Pathway
stvb00730
Thiamine metabolism
stvb01100
Metabolic pathways
stvb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
OH133_19170 (thiC)
Enzymes [BR:
stvb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
OH133_19170 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
UZI30070
LinkDB
All DBs
Position
complement(4223874..4225694)
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AA seq
606 aa
AA seq
DB search
MTTADARTPASKQNDGTPDGTTPGDGTRNDEAGKSIGWHKGYVQGSRPDLRVPVRQVHLT
NGKDVTLYDTSGPYTDPSIDTDVRRGLAPLRENWIIARGDTEEYAGRQARPEDDGLKHTS
PRGGLRNLDAVFPGRPRQPRRSRDGRPVTQLAYARRGEITPEMEYVAIRENVEPEVVREE
IAQGRAVLPANVNHPEIEPMIIGKRFLVKVNANIGNSAVTSSIEEEVDKMTWATKWGADT
VMDLSTGRNIHTTREWVLRNSPVPIGTVPLYQALEKVDGRAEELTWEIYKDTVIEQAEQG
VDYMTVHAGVRLPYVPLTARRKTGIVSRGGSIMAAWCLAHHKESFLYEHFEELSEILATY
DVTYSLGDGLRPGSIADANDEAQFAELRTLGELNTIAKRFGVQTMIEGPGHVPMHKIKEN
IDLQQEICEEAPFYTLGPLTTDVAPAYDHITSGIGAAMIAWWGTAMLCYVTPKEHLGLPN
RDDVKTGVITYKIAAHAADLAKGHPGAQEWDDALSDARFEFRWEDQFNLALDPDTAREFH
DETLPAEPAKTAHFCSMCGPKFCSMKISQDIRRQHGGSQEEIEEGMAEKSKEFAAAGNRV
YLPIAD
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagcggacgcacgcacgcctgcctcgaaacagaacgacggaacgccggacggc
acgacgccgggcgacgggacgcggaacgacgaggccgggaagtccatcggctggcacaag
gggtacgtccagggctcgcgcccggacctccgggtgccggttcgacaggtgcacctcacc
aacggcaaggacgtgacgctgtacgacacgtccgggccgtacaccgatccctccatcgac
accgatgtccgccggggcctcgcgcccttgcgggagaactggatcatcgcccgcggcgac
accgaggagtacgcgggccggcaggcccgccccgaggacgacgggctcaagcacacctcg
ccgcgcggcggactgcgcaacctcgacgcggtcttccccggccgcccgcgccagccgcgc
cgcagccgcgacggacgtcccgtcacccagctcgcgtacgccaggaggggggagatcacc
ccggagatggagtacgtggcgattcgggagaacgtggagcccgaggtcgtccgcgaggag
atcgcgcagggccgggcggtgctgcccgccaacgtcaaccaccccgagatcgagccgatg
atcatcggcaagcggttcctggtgaaggtcaacgccaacatcggcaactcggccgtcacc
tcctccatcgaggaggaggtggacaagatgacctgggcgacgaagtggggcgccgacacg
gtcatggacctgtccaccggccgcaacatccacaccacccgtgaatgggtgctgcgcaac
tccccggtgccgatcggcaccgtcccgctctaccaggccctggagaaggtcgacggccgg
gcagaggagctgacctgggagatctacaaggacaccgtcatcgagcaggccgagcagggc
gtggactacatgacggtgcacgccggtgtgcgcctgccgtacgtcccgctgacggcccgt
cgtaagaccggcatcgtctcgcgcggcggctcgatcatggcggcctggtgtctcgcccat
cacaaggagtcgttcctctacgagcacttcgaggagctctccgagatcctcgcgacctac
gacgtcacctactccttgggtgacggactgcgtcccggttcgatcgctgacgccaacgac
gaggcgcagttcgccgagctgcgcacgctgggtgagctgaacacgatcgccaagcgcttc
ggcgtccagaccatgatcgagggccccgggcatgtcccgatgcacaagatcaaggagaac
atcgacctccagcaggagatctgcgaggaggcgccgttctacacgctcggcccgctgacc
acggacgtcgcgcctgcctacgaccacatcacctcgggcatcggcgccgcgatgatcgcc
tggtggggcaccgcgatgctctgctacgtcacgcccaaggagcacctggggctgccgaac
cgggatgacgtgaagacgggcgtcatcacctacaagatcgccgcccacgcggccgacctg
gccaaggggcacccgggtgcgcaggagtgggacgacgctctctccgacgcacggttcgag
ttccgctgggaggaccagttcaacctggccctcgacccggacacggcacgggagttccat
gacgagacgctgcccgccgaaccggcgaagacggcgcacttctgctcgatgtgcgggccg
aagttctgctcgatgaagatctcccaggacatccggcgtcagcacggcggttcgcaggag
gagattgaggagggcatggccgagaagtcgaaggagttcgcggccgcaggcaaccgggtc
tacctgcccatcgccgactga
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