Streptomyces sp. VB1: OH133_19430
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Entry
OH133_19430 CDS
T11054
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
stvb Streptomyces sp. VB1
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stvb03032
]
OH133_19430 (gyrB)
03400 DNA repair and recombination proteins [BR:
stvb03400
]
OH133_19430 (gyrB)
Enzymes [BR:
stvb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OH133_19430 (gyrB)
DNA replication proteins [BR:
stvb03032
]
Prokaryotic type
DNA Topoisomerases
OH133_19430 (gyrB)
DNA repair and recombination proteins [BR:
stvb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OH133_19430 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
UZI33710
LinkDB
All DBs
Position
4282105..4284120
Genome browser
AA seq
671 aa
AA seq
DB search
MPSTAGEHGEVAASYDASAITVLEGLDAVRKRPGMYIGSTGERGLHHLVQEVVDNSVDEA
MAGHADTIDVTILADGGVRVIDNGRGIPVGIVPSEGKPAVEVVLTVLHAGGKFGGGGYAV
SGGLHGVGVSVVNALSTRVAVEVKTDGHRWTQDYKLGVPTAPLAQHEATDETGTTVTFWA
DGDIFETTEYSFETLSRRFQEMAFLNKGLTLKLTDERESAKATAGADSADAVEPAEEEAA
RTVTYHYENGIVDFVKYLNSRKGDVIHQSVIDIEAEDKDRLLSAEIAMQWNTQYTEGVYS
FANAIHTHEGGTHEEGFRAALTSLVNRYARDKKLLREKDDNLTGEDVREGLTAIISVKLG
EPQFEGQTKTKLGNTEAKTFVQKVVHEQLTDWFDRNPNEAADIIRKGIAASTARVAARKA
RDLTRRKGLLESASLPGKLSDCQSNDPTKCEIFIVEGDSAGGSAKSGRNPMYQAILPIRG
KILNVEKARIDKILQNTEVQALISAFGTGVHEDFDIEKLRYHKIILMADADVDGQHINTL
LLTFLFRFMRPLVEQGNVYLSRPPLYKIKWGRDDFEYAYSDRERDALVALGKQNGKRIKE
DSIQRFKGLGEMNAEELRITTMDVDHRVLGQVTLDDAAQADDLFSVLMGEDVEARRSFIQ
RNAKDVRFLDI
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
attccgtccacagcgggcgagcacggcgaggtcgccgcctcgtacgacgccagcgcgatc
accgtgctggaagggctggacgcggtccgcaagcggcctggcatgtacatcggctcgacc
ggtgagcgcggcctgcaccacctcgtgcaggaagtcgtcgacaactcggtcgacgaggcg
atggcgggccacgcggacaccatcgacgtcacgatcctcgccgacggcggggtgcgtgtg
atcgacaacggtcgtggcatcccggtcggcatcgtgccgtccgaaggaaagccggccgtc
gaggtcgtgctgaccgtgctgcacgcgggcggcaagttcggcggcggcggttacgccgtc
tccggcgggctgcacggcgtcggcgtctccgtcgtcaacgccctgtccacccgggtcgcc
gtcgaggtcaagaccgacggccaccgctggacccaggactacaagctcggtgtcccgacc
gccccgctggcccagcacgaggccaccgatgagaccggtacgacggtcaccttctgggcc
gacggggacatcttcgagaccaccgagtacagcttcgagaccctctcgcgccgcttccag
gagatggcgttcctcaacaagggcctcaccctcaagctcaccgacgagcgggagtctgcg
aaggcgacggcgggcgcggacagcgcggacgcggtcgagcccgccgaggaggaggccgcc
cgcacggtcacgtaccactacgaaaacggcatcgtcgatttcgtgaagtacctcaactcc
cgcaagggcgacgtcattcaccagtcggtgatcgacatcgaggccgaggacaaggaccgt
cttctctcggccgagatcgccatgcagtggaacacgcagtacaccgagggcgtctactcc
ttcgccaacgcgatccacacgcacgagggcggcacgcacgaggagggcttccgtgcggcg
ctgacctcgctggtcaaccggtacgcgcgcgacaagaagctgctccgcgagaaggacgac
aacctcaccggcgaggacgtccgcgagggcctcaccgcgatcatctcggtgaagctgggc
gagccgcagttcgagggccagacgaagaccaagctgggcaacacggaggccaagaccttc
gtgcagaaggtcgtgcacgagcagctgacggactggttcgaccggaatcccaacgaggcc
gccgacatcatccgcaagggcatcgccgcctcgaccgcccgggtggcggcccgcaaggcg
cgtgacctgacgcggcgcaaggggctgctggagagcgcctcgctgccgggcaagctcagc
gactgccagtcgaacgaccccaccaagtgcgagatcttcatcgtcgagggtgactccgcc
ggcggttcggcgaagtccggccgtaacccgatgtaccaggcgatcctgcccatccgcggc
aagatcctgaacgtcgagaaggcccggatcgacaagatcctccagaacaccgaggtccag
gcgctgatctcggcgttcggcaccggggtccacgaggacttcgacatcgagaagctccgc
tatcacaagatcatcctgatggcggacgccgacgtcgacggtcagcacatcaacaccctg
ctgctgaccttcctcttccgcttcatgcggcccctggtggagcaggggaacgtctacctc
tcgcgcccgccgctctacaagatcaagtggggccgggacgacttcgagtacgcgtactcg
gaccgggagcgcgacgccctggtggcgctcggcaagcagaacggcaagcggatcaaggaa
gactcgatccagcgcttcaagggcctcggcgagatgaacgccgaagagctgcgcatcacg
accatggacgtcgaccaccgggtgctcgggcaggtgacgctggacgacgcggcgcaggcc
gacgacctgttctcggtgctcatgggcgaggacgtcgaggcgcggcgctcgttcatccag
cgcaatgccaaggacgtccgcttcctcgacatctga
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