Streptomyces sp. VB1: OH133_19875
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Entry
OH133_19875 CDS
T11054
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
stvb Streptomyces sp. VB1
Pathway
stvb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OH133_19875 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stvb01007
]
OH133_19875 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stvb03016
]
OH133_19875 (aspS)
03029 Mitochondrial biogenesis [BR:
stvb03029
]
OH133_19875 (aspS)
Enzymes [BR:
stvb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
OH133_19875 (aspS)
Amino acid related enzymes [BR:
stvb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
OH133_19875 (aspS)
Transfer RNA biogenesis [BR:
stvb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
OH133_19875 (aspS)
Prokaryotic type
Other AARSs
OH133_19875 (aspS)
Mitochondrial biogenesis [BR:
stvb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
OH133_19875 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UZI30199
LinkDB
All DBs
Position
4374508..4376304
Genome browser
AA seq
598 aa
AA seq
DB search
MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGNE
ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVTEVEVLGEAGPLPFTINTEDGV
NEERRLEYRFLDLRRERMHRNILLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF
VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE
MSFVEQEDVFQPIEKLMTELFTEFGNGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELV
DISDVFADSGFKAFAGKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWVRVGEDGA
LAGPIAKFLTETDVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVEAAKRAGHFEEG
VFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLADLEEKDPLDILAWQYDIVCNGIE
LSSGAIRNHEPELMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGIAPGVDRIVMLL
ADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELNIQLRKPVAAKGASEKPASEK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggtacaggtcccacacctgcggcgagctccgcgcctctgacgtcggcaccgac
gtccggctgagcggctggctgcacaatcgccgagacctgggtggcatcctcttcatcgat
ctgcgcgaccactacggtctggtgcagctcgtcgcccgccccggcacccccggcaacgag
gccctggcgaagctcaccaaggagaccgtcgtccggatcgacggcaaggtctccgcgcgc
ggagccgacaacgtcaacccggagctgccgaccggcgagatcgagatcgaggtcaccgag
gtcgaggtgctcggcgaggccggcccgctgcccttcacgatcaacaccgaggacggcgtc
aatgaggagcggcgcctggagtaccgcttcctcgacctgcgccgcgagcgcatgcaccgc
aacatcctgctgcgctcggccgtgatcgcctccatccgctccaagatggtggccctcggc
ttcaacgagatggcgaccccgatcctcaccgcgacctcccccgagggcgcccgtgacttc
gtcgtcccgtcccggctgaaccccggcaagttctacgcgctgccgcaggccccgcagcag
ttcaagcagctgctgatgatctcgggcttcgaccgctacttccagatcgcgccctgcttc
cgcgacgaggacgcccgcgcggaccgttccccgggcgagttctaccagctcgacgtcgag
atgtccttcgtcgagcaggaggacgtcttccagccgatcgagaagctgatgaccgagctc
ttcaccgagttcggcaacggccgcgaggtcacctcgccgttcccgcgcatcccgttccgc
gagtcgatgctgaagtacggcaacgacaagccggacctgcgcgccaagctggagctcgtc
gacatctcggacgtcttcgccgactccgggttcaaggcgttcgccggcaagcacgtccgc
gcgctgccggtcccggacaccgcgggccagtcccggaagttcttcgacggcctcggtgag
tacgccgtcgagcacggcgccaagggccttgcctgggtgcgcgtgggcgaggacggggcg
ctggccggaccgatcgccaagttcctcaccgagaccgacgtcaagacgctcaccgagcgc
ctctcgctggtcccgggccacgccgtcttcttcggtgcgggcgagttcgacgaggtctcc
aagatcatgtcggcggtccgggtcgaggccgccaagcgcgccggccacttcgaggagggc
gtcttccggttctgctggatcgtcgacttcccgatgtacgagaaggacgaggagaccggg
aagatcgacttctcgcacaaccccttctcgatgccccagggcggcctcgccgacctggag
gagaaggacccgctcgacatcctcgcctggcagtacgacatcgtctgcaacggcatcgag
ctgtcctcgggagccatccgtaaccacgagcccgagctgatgctcaaggccttcgagatc
gccggttacgaccgcgagaccgtcgagcacgagttcgcgggcatgctccgcgccttccgt
ctcggcgccccgccgcacggtggcatcgccccgggcgtcgaccgcatcgtgatgctgctc
gccgacgagcccaacatccgcgagacgatcgccttcccgctcaacggcaacgcccaggac
ctgatgatgggcgccccgaccgagctggacgagacccgtctgcgcgagctgaacatccag
ctgcgcaagccggtcgccgcgaagggcgcgtcggagaagcccgcctcggagaagtag
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