Streptomyces sp. VB1: OH133_21695
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Entry
OH133_21695 CDS
T11054
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
stvb Streptomyces sp. VB1
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stvb03400
]
OH133_21695 (radA)
DNA repair and recombination proteins [BR:
stvb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OH133_21695 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
AAA_16
AAA
nSTAND3
AAA_24
DUF7125
AAA_14
NACHT
AAA_30
RecA
NTPase_1
AAA_5
ABC_tran
DAP3
PAXNEB
AAA_19
DUF7129
Rad51
AAA_29
RsgA_GTPase
NPHP3_N
MMR_HSR1
ATPase_2
SLFN-g3_helicase
MCM
AAA_18
TIP49
NB-ARC
AAA_7
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
UZI30518
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Position
complement(4770818..4772239)
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AA seq
473 aa
AA seq
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MAARTKSAKDRPSYRCTECGWTTAKWLGRCPECQAWGTVEEFGGAPAVRTTAAGRVSTAA
VPIGQVDSRQATARSTGVGELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKAASED
HRTLYVTAEESASQVRMRADRIRAINDHLYLAAETDLSAVLGHLDAVKPSLLVLDSVQTV
ASPEIDGAPGGMAQVREVAGALIRASKDRGMATLLVGHVTKDGAIAGPRLLEHLVDVVLS
FEGDRHARLRLVRGVKNRYGATDEVGCFELHDEGITGLADPSGLFLTRRDVAVPGTCLTV
TLEGKRPLVAEVQALTVDSQIPSPRRTTSGLETSRVSMMLAVLEQRGRITALGKRDIYSA
TVGGVKLTEPAADLAIALALASAASDTPLPKNLVAIGEVGLAGEVRRVTGVQRRLAEAHR
LGFTHALVPTDPGKVPAGMKVTEVADMGDALRVLPRRSRQEAPQPRQEDNARR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccgtacgaaatccgcgaaggaccggccgtcctaccgctgtaccgaatgcggc
tggaccaccgccaagtggctcggccgttgtcccgagtgccaggcgtgggggacggtcgag
gagttcggcggcgcccccgccgtgcgcaccaccgcggcgggccgggtctccacggcggcc
gtgccgatcggccaggtcgacagccggcaggccaccgcccggtcgaccggcgtcggtgag
ctggaccgggtgctcggcggcgggctcgtgccgggcgcggtcgtgctgctggcgggcgag
cccggcgtcggcaagtcgacgctgctgctggacgtggcggccaaggcggcgagcgaggac
caccgcacgctctatgtgaccgccgaggagtccgcgagccaggtccggatgcgggccgac
cggatccgggcgatcaacgaccacctctacctcgcggcggagaccgatctgtccgcggtg
ctcggccacctggacgcggtgaagccctcgttgctcgtcctggactcggtgcagacggtc
gcctcgcccgagatcgacggcgcgcccggcgggatggcccaggtccgggaggtcgccgga
gcgctcatccgggcctccaaggatcgcggcatggccacgctgctcgtcggccacgtcacc
aaggacggcgcgatcgccgggccccggctgctggagcacctggtggacgtggtgctgtcc
ttcgagggcgaccggcacgcccggctgcggctggtgcgcggcgtcaagaatcgttacggg
gcgaccgacgaggtcggctgcttcgagctgcacgacgagggcatcaccggtctcgccgac
ccctcgggcctcttcctgacccgccgcgacgtggcggtgccgggcacctgtctgacggtg
accctggagggcaagcggcccctggtcgccgaggtgcaggcgctcaccgtcgactcgcag
atcccctcaccccggcgcaccacctcgggtctggagacctcccgggtctcgatgatgctc
gccgtgctggagcagcgcggccggatcaccgcgctcggcaagcgggacatctacagcgcg
acggtgggcggcgtgaagctcaccgagcccgccgccgacctggcgatcgcgctcgcgctg
gccagcgcggccagcgacaccccgctcccgaagaacctggtcgcgatcggtgaggtgggg
ctcgcgggcgaggtcaggagagtcaccggggtgcagcggagactggccgaggcccaccgt
ctgggcttcacccacgcgctcgttccgacggacccggggaaggtcccggccggtatgaag
gtcacggaagtcgccgacatgggcgacgctctgcgggtcctcccacgccggtctcgtcaa
gaggcgccgcagcctcgtcaggaagacaacgcgcgccggtag
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