Streptomyces sp. VB1: OH133_22135
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Entry
OH133_22135 CDS
T11054
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
stvb Streptomyces sp. VB1
Pathway
stvb00061
Fatty acid biosynthesis
stvb00071
Fatty acid degradation
stvb01100
Metabolic pathways
stvb01212
Fatty acid metabolism
stvb02024
Quorum sensing
stvb04146
Peroxisome
Module
stvb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OH133_22135
00071 Fatty acid degradation
OH133_22135
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OH133_22135
09145 Cellular community - prokaryotes
02024 Quorum sensing
OH133_22135
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
stvb01004
]
OH133_22135
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stvb04147
]
OH133_22135
Enzymes [BR:
stvb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OH133_22135
Lipid biosynthesis proteins [BR:
stvb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OH133_22135
Exosome [BR:
stvb04147
]
Exosomal proteins
Exosomal proteins of breast milk
OH133_22135
Exosomal proteins of breast cancer cells
OH133_22135
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
UZI30589
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Position
4864598..4866523
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AA seq
641 aa
AA seq
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MSTPSSAAAATAPAATPVLVEPTKKRGPDGRVQEVSVPKFAPAVERGSLAEIPFDNARQA
PSDPVLSRKDAEGAWRDVSAAEFAAEVLAVAKGLVAEGLRAGDRVAIMARTTYEWTLLDF
ASWAAGLVTVPIYPTSSAFQARWILQNSGAVACAVETKEQGRLISQERKQLGDLAHLWQF
DTGAIGRLKSLGKDIPDAVVTARRAALEPDTPATLIYTSGTTGRPKGCVLTHGNFFAEVD
NAIELLHPVFKSVSKDPASTLLFLPLSHVFGRMVAIGCMRARVRLGHAPSIRTEDLLADL
AGFRPTFLLAIPYVLEKVYNTGRATAEKMGRASSFDRAARIAQRYGKAVEAAEHGTGPGP
GLGLRAARALYDPLVYRRIRAALGGRVRYVICGGSPLGRRLAAFYEGAGIGIFEGYGLTE
TTAAHTVTPPLKPRLGTVGWPLPGTSVRIAEDGEVLLRGGQVFRGYWDGERAAVSPALLP
DDWFPTGDLGALDEDGYLTITGRKKDIIITSGGKNVTPAPLEDWLRAHPLVSQCMVVGDN
RSFITALLTLEPDGLQHWRRMTKKQDIPMRDLIHDEDLRTSLQKAVDEANRLVSRAESIR
KFTVLPVDFTEEKGHLTPSLKLKRDAIARDFAGEIEALYRK
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaacgccatcttccgctgccgccgccaccgcccccgcagccacacccgttctggtc
gagccgacgaagaagcgcggccccgacggcagggtccaggaggtctccgtaccgaagttc
gccccggccgtggagcgcggctcgctggccgagatcccgttcgacaacgcccgccaggcc
ccgtcggacccggtgctcagccggaaggacgccgagggcgcgtggcgggacgtgagcgcc
gccgagttcgccgccgaggtgctggcggtggccaagggcctggtggcggaggggctgcgg
gcgggggaccgggtcgcgatcatggcccggacgacgtacgagtggacgctgctggacttc
gcgtcgtgggcggccggcctggtgacggtccccatctacccgacctcctccgcgttccag
gcccgctggatcctccagaactcgggtgcggtggcgtgcgcggtggagacgaaggaacag
gggcgcctgatcagccaggagcgcaagcagctcggcgacctggcgcatctgtggcagttc
gacacgggggcgatcggccggctcaagtccctcggcaaggacatcccggacgcggtggtc
acggcccgccgggccgccctggaaccggacacccccgccaccctgatctacacctcgggc
accacgggccgcccgaagggctgcgtcctgacccacggcaacttcttcgccgaggtcgac
aacgcgatcgaactcctccacccggtcttcaagtcggtctcgaaggacccggcctccacc
ctcctcttcctgcccctctcgcacgtcttcggccgcatggtggcgatcggctgcatgcgg
gcgagggtgcgcctgggccacgccccgtccatccggacggaggacctcctcgccgacctg
gcgggcttccgccccaccttcctcctcgccatcccgtacgtcctggagaaggtctacaac
acgggccgggcgacggccgagaagatgggccgggcctcctcgttcgaccgggcggcccgc
atagcccagcgctacggcaaggcggtcgaggccgccgaacacggcacaggacccggcccg
ggcctcggcctgcgcgccgcccgcgccctgtacgacccgctggtctaccgccgtatccgg
gcggcgctcggcggcagggtccggtacgtgatctgcggcggctccccgctcggccgccgg
ctcgccgcgttctacgagggcgcgggcatcggcatcttcgagggctacggactcaccgag
accacggccgcccacacggtgaccccacccctcaaaccccgcctgggcacggtcggttgg
cccctgcccgggacgtcggtacgcatcgcggaggacggcgaggtgctgctgcggggcggc
caggtcttccggggctactgggacggcgaacgggcggcggtgtccccggcgctcctgccg
gacgactggttccccacgggcgacctgggcgcgctggacgaggacggctacctgacgatc
acgggccgcaagaaggacatcatcatcacgtcgggcggcaagaacgtcaccccggccccg
ctggaggactggctgcgcgcccaccccctggtcagccagtgcatggtcgtcggcgacaac
cgctcgttcatcaccgccctgctcaccctggagccggacggcctccagcactggcgccgg
atgaccaagaagcaggacatcccgatgcgggacctgatccacgacgaggacctgcgcacg
tcgctccagaaggcggtcgacgaggccaaccgcctggtctcccgcgcggagtcgatccgt
aagttcacggtcctgccggtggacttcacggaggagaagggccatctgacgccgtcgctg
aagctgaagcgggacgcgatcgcgcgggacttcgcaggggagatcgaggcgttgtaccgg
aagtga
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