Streptomyces sp. VB1: OH133_28830
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Entry
OH133_28830 CDS
T11054
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
stvb Streptomyces sp. VB1
Pathway
stvb00061
Fatty acid biosynthesis
stvb00071
Fatty acid degradation
stvb01100
Metabolic pathways
stvb01212
Fatty acid metabolism
stvb02024
Quorum sensing
stvb04146
Peroxisome
Module
stvb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OH133_28830
00071 Fatty acid degradation
OH133_28830
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OH133_28830
09145 Cellular community - prokaryotes
02024 Quorum sensing
OH133_28830
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
stvb01004
]
OH133_28830
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stvb04147
]
OH133_28830
Enzymes [BR:
stvb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OH133_28830
Lipid biosynthesis proteins [BR:
stvb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OH133_28830
Exosome [BR:
stvb04147
]
Exosomal proteins
Exosomal proteins of breast milk
OH133_28830
Exosomal proteins of breast cancer cells
OH133_28830
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Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Prot_ATP_ID_OB_C
Phage_tail_tube_init
Motif
Other DBs
NCBI-ProteinID:
UZI31770
LinkDB
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Position
complement(6468866..6470662)
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AA seq
598 aa
AA seq
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MREFSLPALYEVPTDGNLTDLIRRNAAQHPEVAVMSRKVAGVWTDVSATRFLAEVRAAAK
GLIASGVQPGDRVALMSRTRYEWVLLDFAIWSAGAVTVPVYETSSAEQVQWILGDSGAVA
VLVESDAHAASVASVRDALPELEHVWQIDAGAVDALGRAGAEVSEETMDLRTRSAKADDP
ATIVYTSGTTGRPKGCVLTHRSFFAECGNVVERLKPLFRTGECSVLLFLPAAHVFGRLVE
VASVMAPIKLGCVPDIKNLTDELASFRPTLILGVPRVFEKVYNAARAKAQADGKGKIFDR
AADTAIAYSRALSTPQGPALGLRLKHKLFDKLVFGKLRAVLGGRGEYAISGGAPLGERLG
HFYRGIGFTVLEGYGLTETCAATAFNPWDRPKIGTVGQPLPGSVVRIADDGEVLLHGEHL
FTGYWNNESASAEALADGWFHTGDIGTLDEDGYLAITGRKKEIIVTAGGKNVAPAVIEDR
IRAHALVAECMVVGDGRPFVGALVTLDEEFLSRWAEENGKPAGSTALSLREDAELLAEVQ
RAVDDGNAAVSKAESVRRFRILPAQFTEEAGHITPSLKLKRNVVAKDFADEVESIYRS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgagttcagccttccggccctgtacgaggtcccgacggacggcaacctgacggat
ctcatccgccgcaatgccgctcagcatcccgaagtcgcggtgatgagccgcaaggtggcc
ggcgtctggacggacgtcagtgccacgcggttcctggccgaggtgagagccgccgccaaa
ggtctgatcgcctcgggcgtgcagcccggcgaccgggtcgccctgatgtcgcgcacccgt
tacgagtgggtgctgctggacttcgcgatctggagcgcgggcgcggtgaccgtgccggtg
tacgagaccagctccgccgaacaggtgcagtggatcctcggtgactccggggcggtggcg
gtgctcgtggagagcgacgcgcacgccgcctccgtggcctccgtccgggacgcgctgccg
gagctggagcacgtctggcagatcgacgcgggcgcggtggacgcgctgggcagggccggg
gccgaggtctcggaggagaccatggacctgcgcacgcgcagcgccaaggccgacgacccg
gcgacgatcgtctacacctcgggcaccacgggccgccccaagggctgtgtgctcacccac
cgcagcttcttcgcggagtgcggcaacgtggtggagcggctgaagcccctcttccgtacg
ggcgagtgctcggtgctgttgttcctgcccgccgcgcacgtcttcggccggctggtcgag
gtggcctcggtgatggccccgatcaagctcggctgtgtgccggacatcaagaacctcacg
gacgagctggcctcgttccggccgacgctgatcctgggcgtgccccgggtcttcgagaag
gtctacaacgcggcgcgcgccaaggctcaggccgacggcaagggcaagatcttcgaccgg
gcggccgacacggcgatcgcctacagccgggcgctgagcaccccgcagggtcccgcgctg
gggctgaggctcaagcacaagctcttcgacaagctggtcttcggcaagctccgcgccgtc
ctcggcggccggggcgagtacgcgatctcgggcggcgctccgctgggcgagcggctcggc
cacttctaccggggcatcggcttcacggtcctggagggctacggcctgacggagacctgc
gcggcgaccgcgttcaacccgtgggaccggccgaagatcggcacggtcggccagccgctg
cccggttcggtcgtgcggatcgcggacgacggcgaggtgctgctgcacggcgagcacctg
ttcaccggttactggaacaacgagtcggcctcggccgaggcgctggccgacggctggttc
cacaccggggacatcggcacgctcgacgaggacggctacctcgcgatcaccggccgcaag
aaggagatcatcgtgacggcgggcggcaagaacgtcgcccccgcggtgatcgaggaccgc
atccgcgcgcacgccctggtcgcggagtgcatggtggtcggcgacggccgtccgttcgtc
ggcgcgctggtcacgctggacgaggagttcctgagccgctgggccgaggagaacggcaag
ccggccggctcgacggccctgtcgctgcgcgaggacgcggagctgctggccgaggtgcag
cgggcggtggacgacgggaacgcggcggtctccaaggccgaatccgtgcgcaggttccgt
atcctgccggcccagttcaccgaggaggcgggccacatcacgccgtcgctgaagctgaag
cggaacgtggtggcgaaggacttcgcggacgaggtggagtcgatctaccgctcctga
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