Streptomyces sp. VB1: OH133_31305
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Entry
OH133_31305 CDS
T11054
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
stvb Streptomyces sp. VB1
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
stvb03051
]
OH133_31305 (pafA)
Enzymes [BR:
stvb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
OH133_31305 (pafA)
Proteasome [BR:
stvb03051
]
Prokaryotic proteasome
Bacterial regulatory particles
OH133_31305 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
UZI32224
LinkDB
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Position
7010884..7012245
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLICGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDLTGQRKVRLASGREASAIEVQREYYEKAVDFVERRGIRTGTV
DQVLELWGRTLDAIEAEDLDRIDTEIDWVMKYKLIERYRAKHNMTMSNPRVAQIDLAYHD
IHRRRGLFYLLERKGQTARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDERVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgactgtcacctgacgaagtggcgcgctacctcttccgccgtgttgtgtcatgg
ggccgcagcagcaatgtctttctgcggaacggcgcccgcctctacctcgacgtgggatcg
catccggaatatgcaacccccgaatgcgacaacgtgaccgaactggtcacgcacgacaaa
gcgggcgagcgcattctcgaaggcctgctcgtcgacgccgaacgccgcctgcacgaggag
ggaatcgcgggcgacgtctatctcttcaagaacaacaccgactcggcgggaaactcctac
ggctgccacgagaactacctcgtcgcccgccacggagaattctcccggctcgcggacatc
ctcattccgttcctcgtcaccaggcagctgatctgcggtgcgggcaaggtgctccagacc
ccgcgcggcgcggtctactgcgtcagccagcgtgccgagcacatctgggagggcgtcagc
tccgcgaccacccgctcccggccgatcatcaacacccgcgacgaaccccacgccgacgcc
gagcggtaccgccgcctccacgtcatcgtcggcgactcgaacatgtccgagacgaccatg
ctgctcaaggtcggcgccaccgacctggtgctccgcatgatcgaggcgggcacggtgatg
cgcgacctgaccctggagaacccgatccgggcgatccgcgaggtcagccacgacctcacc
gggcagcgcaaggtgcgcctggccagcggccgggaggcctcggccatcgaggtccagcgg
gagtactacgagaaggccgtggacttcgtcgagcgccggggcatccgcaccggcaccgtc
gaccaggtcctggagctgtggggccgcaccctggacgcgatcgaggccgaggacctcgac
cggatcgacaccgagatcgactgggtcatgaagtacaagctcatcgagcggtaccgggcc
aagcacaacatgaccatgtcgaatccgcgggtcgcccagatagacctcgcctaccacgac
atccaccgccgccgaggcctcttctacctcctggagcgcaaggggcagaccgcccgcatc
tgcaacgacctgaagatcttcgagggcaagtcggtgcccccgcagaccacccgggcgcgg
ctgcgcggcgacttcatccgcagggcccaggagcagcggcgggacttcaccgtcgactgg
gtccacctcaagctcaacgaccaggcgcagcgcacggtgttgtgcaaggacccgttccgt
tccgtggacgagcgggtggagaagctgatcgccggcatgtga
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