Streptomyces sp. VB1: OH133_36385
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Entry
OH133_36385 CDS
T11054
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stvb Streptomyces sp. VB1
Brite
KEGG Orthology (KO) [BR:
stvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stvb03021
]
OH133_36385
Transcription machinery [BR:
stvb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OH133_36385
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_10
DUF7343
HTH_23
MarR_2
PF0610-like_N
HTH_37
MarR
HTH_3
HTH_24
GerE
KORA
Motif
Other DBs
NCBI-ProteinID:
UZI33133
LinkDB
All DBs
Position
complement(8249272..8250144)
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AA seq
290 aa
AA seq
DB search
MTAQTAQTAGTEQTGTTEELPWIEDAGKVAPMDARRLSRLFFDRLQTLEEGTHEYQYARN
TLIEMNLSLVRFAANRFRNRGSGDMEDIIQVGTIGLIKAIDRFDLSREVEFTSFAVPYIV
GEIKRFFRDTSWAVHVPRRLQELRVDLAKAKESLAGDLDRDPTVRELAKDLGIEESEVTE
GIVASNGYTAGSLDMPTDTAEAGPRHTSGRTFADVLGEPDPAMETVENLHALAPLLGELD
ERERRIIDMRFGQEMTQAQIGAELGISQMHVSRLLSRMLGKLRSGMLVQE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacagaccgcgcagacggccggtacggagcagacgggcaccaccgaggaactt
ccgtggatcgaggatgccgggaaggtcgccccgatggacgcgcgccggctctcgcgcctc
ttcttcgaccgcctccagacgctggaggagggcacgcacgaataccagtacgcgcgcaac
acccttatcgagatgaacctgtccctcgtccgcttcgccgccaaccgcttccgcaaccgg
ggcagcggcgacatggaggacatcattcaggtcggcaccatcgggctgatcaaggcgatc
gaccgcttcgacctctcgcgggaagtcgagttcacctcgttcgcggtgccgtacatcgtc
ggggagatcaagcggttcttccgtgacacgagctgggcggtgcacgtgccgcggcgcctc
caggaactgcgggtcgacctcgccaaggcgaaggagtccctggcgggcgacctcgaccgg
gaccccaccgtgcgggagctggcaaaggacctggggatcgaggagtccgaggtcacggag
gggatcgtcgcctccaacggctacacggcgggctccctggacatgccgaccgacaccgcg
gaggccggcccccgtcacacctccgggcggaccttcgccgacgtactgggcgagccggac
cccgccatggagaccgtggagaatctccacgccctcgcgcccctgctgggcgaactggac
gagcgggagcgccggatcatcgacatgcgcttcggccaggagatgacccaggcgcagatc
ggcgcggagctcggaatatcacagatgcacgtgtcccggctgctgagccggatgctgggc
aagctgcggagcgggatgctcgtccaggagtga
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