Streptococcus thermophilus MN-ZLW-002: Y1U_C0908
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Entry
Y1U_C0908 CDS
T02116
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stw
Streptococcus thermophilus MN-ZLW-002
Pathway
stw03420
Nucleotide excision repair
stw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Y1U_C0908
03430 Mismatch repair
Y1U_C0908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stw03400
]
Y1U_C0908
Enzymes [BR:
stw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Y1U_C0908
DNA repair and recombination proteins [BR:
stw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Y1U_C0908
MMR (mismatch excision repair)
Other MMR factors
Y1U_C0908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFJ83357
LinkDB
All DBs
Position
complement(881757..884069)
Genome browser
AA seq
770 aa
AA seq
DB search
MNPLLTGMNDQQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMINPWNILAITF
TNKAAREMRERAVALNPATSETLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLM
KRILKNLNLDPKKWNERAILGTISNAKNDLLDEIAYEHQAGDMYTQIVAKCYKAYQEELR
RSEAMDFDDLIMMTLRLFDKNPDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPEAKVVLLEENYRSTKKILQAANEVIKNNRN
RRPKKLWTQNDEGEQIVYYRANDERDEAVFVASTIDNIVREKVKNFKDFAVLYRTNAQSR
TIEEALLKSNIPYTMVGGTKFYSRKEIRDVISYLNLIANTSDNISFERVVNEPKRGVGPG
TLEKLRNFAYEQNMSLLYASANIMLSPIKGKAAQGVYDFANMILNLRDQLDGLSITDTVE
AILDKSGYLDALSMQQTLESQSRIENIEEFMSVTKNFDETNTDGTEDETGIDRLGRFLND
LALIADTDDGEAEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEEPDELEEERR
LAYVGITRAEEILFLTNANTRTLFGKTSYNRPSRFLREISDDLLQYQGLARPANSSFGVR
FTKEEPIQFGQGMSLQQALQTRKANAQPQKHTGGAQPFSKATGGLPFSKASDSGNSATDW
EIGDIAHHKKWGDGTVLEVTGSGKTQELKIKFPEVGLKKVLASVAPIVKK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaacccattattaactggtatgaatgatcaacaagccgaagcagtccaaacgactgaa
ggccctcttttgattatggctggtgctggatcaggtaagactcgtgtccttacccatcgc
attgcctaccttatcgacgaaaaaatgatcaatccttggaatattttggccattaccttt
accaataaggctgcccgtgaaatgcgtgaacgtgcagtggctttaaatcccgcaacttca
gaaaccttgattgcgaccttccatagcatgtgtgtacgaatccttcgtcgtgaagcggat
catattggctacaacagaaactttactattgtagatccaggagaacaacgtactttgatg
aaacgtattctcaagaatctgaatttagatcctaaaaagtggaatgaacgtgccatttta
gggaccatttctaacgccaaaaatgacctcttagatgagatagcttatgagcatcaagct
ggtgacatgtatacgcaaatcgtagccaaatgttacaaggcctatcaagaagaacttcgt
cgtagtgaggccatggatttcgacgatttgattatgatgactcttcgtctctttgacaaa
aatcccgatgtcctcgcttattatcagcaacgttatcagtacattcacgtagatgagtat
caagataccaaccatgctcaataccaattggtaaaactcctagcttcacgctttaagaat
atctgtgtcgtgggtgatgctgaccaatcaatctatggatggcgtggagctgatatgcag
aacattcttgattttgagaaggattatcctgaagctaaggttgtccttctggaagaaaac
taccgttcaaccaagaaaattcttcaagcggctaacgaagtcatcaagaacaaccgcaac
cgccgtcctaagaaactttggactcaaaatgatgaaggtgaacagattgtttattaccgt
gctaacgacgagcgtgatgaagctgtattcgtagcttcaacaatcgataatatcgtccgt
gaaaaagtcaagaatttcaaagacttcgctgttctttaccgtaccaatgctcagtctcgt
accattgaggaagccttgctcaagtctaatattccatatacaatggttggtgggacaaaa
ttctacagccgtaaagagattcgtgatgttatttcttatttgaacttgattgccaacact
tctgataacattagttttgaacgtgtcgtcaatgaacctaaacgtggagttgggcctggc
acacttgaaaagcttcggaactttgcctatgagcaaaacatgagtctcctatatgcttca
gctaatatcatgttgtctcctattaaagggaaagcagctcaaggtgtttacgatttcgct
aacatgattctgaacctacgtgatcagttggatgggctaagcattaccgatactgtagaa
gctattttagacaagtctggttatctggatgctctgtccatgcaacaaacgcttgaaagc
caatcacgcattgaaaatatcgaagagttcatgtctgtaacaaagaatttcgacgagact
aatacagatggaactgaagatgagacaggcattgaccgtttaggccgtttcttgaatgat
ttggctttgattgctgacacggacgatggtgaggctgaggcagcagaagtaaccttaatg
accctccacgccgccaaagggcttgaattcccagttgtcttcctaattggtatggaagaa
ggagtcttccctttgtcacgtgcttcagaagagccagatgaactcgaagaagagcgtcgt
ttggcttacgtaggtatcactcgtgcggaagagattcttttccttaccaacgctaatacg
cgtacgctttttggtaagactagctataatcgtcctagccgtttcttacgtgaaatttca
gatgatttattacaatatcaaggtctagcacgtccagccaattcatcatttggtgttcgt
tttacaaaggaagagccgatacaatttggtcagggcatgagtttacaacaagcgcttcag
accagaaaagcaaatgcacagccgcaaaaacatactggtggcgctcagccattttcaaaa
gctactgggggactaccttttagtaaggcttcagactctggaaactcagctacagattgg
gaaatcggagatatcgctcaccacaagaaatggggagatggtaccgtcctagaagtaact
ggaagtggcaagacacaggaacttaagataaaatttccagaagttggacttaaaaaagtc
ttggcaagcgtagcacctattgtgaagaaatag
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