Streptococcus thermophilus MN-ZLW-002: Y1U_C1609
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Entry
Y1U_C1609 CDS
T02116
Name
(GenBank) ATP-dependent exonuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
stw
Streptococcus thermophilus MN-ZLW-002
Brite
KEGG Orthology (KO) [BR:
stw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stw03400
]
Y1U_C1609
Enzymes [BR:
stw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Y1U_C1609
DNA repair and recombination proteins [BR:
stw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Y1U_C1609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AFJ84058
LinkDB
All DBs
Position
complement(1566132..1569452)
Genome browser
AA seq
1106 aa
AA seq
DB search
MKLLYTDMSQDLTEILTEQASSYAQKGKRVFYIAPSALSFEKERKVLEYLPQSASFDITV
TRFTQMARYFILNTSNPKTQLDDTGLAMIFYKVLLHMGDDELKVYGRLRKDSNFINQLVD
LYKELQQANMTVLDLQHLDQVEKQEDLVRIFSAAQDLLLAGDFDNQSKLSAFFKEITSGH
LDEALSNTVLVIDGFTRFSAEEEALVALLNDKCHQIVVGTYTSQKAYKANFVYGNVYQAS
VDFLRTLAQTYKVIPDYVTTDKEGNLSFARISRLLESRHDFSTVDETVTEQDKHALKVWE
VVNQKEEVAQVAKSIRQLLADGKRYKDILVLLGDEESYKLHVGQIFRKFDIPYYFGKEES
MSSHPLVEFVDSLERIKRYNYRAEDLLNLVKSGLYGGFAQEDLDLFEYYVNFADIKGRHK
FLSDFTANSRDKYNLDQINALRSQLIEPLDKFLNSRKQKGSSLLKKLVVFLEAVQLPSQM
FELSTKASEAEKEQNEQVWKAFTHILEQVETIFGDESLSVDDFLSILRSGMLACDYRTVP
ATVDVVNVKKYDLIQPHSAPYVFALGMTQSHFPKVGQNKSLLSDEERSRINEATDEHRRL
DIVTQINSKRGHFVAMSLFNAASEQLVLSQPQIINESQDDMSVYLKELLDLGIPLVEKGR
NRFEAKGDQIGNYRDLLSTVIALNSSHLDLDLDKETQTFWSVAVRYLRKRLDKDQVLIPK
VIDDVTTTKVDDQVMQLVFPEEEPLKLSATALTTFYNNQYLYFLRYVLELEELESIHPDA
RHHGTYLHRVFERVMGDSSSESFDDKLEKAIAQTNQDQPFEILYTEDQESRFSRQILEDI
ARSTASVLRDNAAVKVEREEVKFDLLLANSIKITGIIDRVDRLTDGALGVVDYKTGKNVF
DIQKFYNGLSPQLVTYLEALRQTYKVDADQLFGAMYLHMQVPQLNLAQIGLEKLAAQAHK
ELTYKGLFVSSETEHLTGGNYDLQKTVTYDKEDLETLLDYNIKLFRSAAEVIRSGNFAIN
PYTEDGKSVQGDQIKSITHFEADRHMGQARKLLRLPKKGKKEAYLELMAKTEEENQMQVS
ENTISFPVIDHAVRVDKKDQEDNHVD
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaaattactttatacggatatgtctcaggatttaacagaaattctgacggagcaggcg
tctagctatgctcaaaagggaaagagggttttttatattgctcctagtgccctgtccttt
gaaaaggagcgaaaggttttagaatacctgcctcagtcagcatcttttgacattacggtg
actcgttttactcagatggctaggtattttattctcaatacgagtaacccaaagactcag
ttggatgatacaggtttggccatgattttttataaagtgttgttgcacatgggagatgat
gagctcaaggtctatggccgtttgcgtaaggatagcaactttattaatcaattagtggac
ctttataaagagttgcagcaggccaatatgacagtattggatttgcagcatttggatcag
gttgaaaaacaagaggatttggtaaggattttcagtgcagctcaggacctcttgttggca
ggagattttgacaatcaatcaaagcttagtgccttctttaaggaaattacctcagggcat
ctggatgaggccttgagtaacacagttttggtcattgatggttttacccgtttctcggct
gaggaggaggctctggttgcactcttgaacgacaagtgccaccagattgtagtggggacc
tatactagtcaaaaagcttataaggccaattttgtttatggcaatgtttatcaagcctca
gtggatttcttgaggactttggctcagacctataaggtgatacccgactacgtgacgaca
gacaaggagggcaatctttcttttgcgcgtattagtcgtcttttggagagccgtcatgac
tttagtacggtagatgagacggtaactgagcaggataagcatgccctgaaggtttgggaa
gtggtcaaccagaaagaagaagtggcccaggttgccaagagtattcgccagttgctggca
gatggcaagcgttacaaggatattttggtcttgcttggtgacgaggagagttataagctt
cacgtggggcagattttccgaaaatttgatattccttattatttcggtaaggaagaaagc
atgtctagccatcctttggtggagtttgtggattcgctagagcgtatcaagcgctataac
taccgtgctgaggatttgcttaaccttgtaaaatccggtctctatggtggttttgctcaa
gaggatttagacctttttgagtattatgtcaattttgcggatatcaaggggcgtcataaa
ttcttgtctgattttacagctaatagtcgtgataagtataatttagaccagatcaatgcc
ttgcggtcacaattgatagagcccttggacaagtttcttaatagtcgcaaacaaaaggga
tctagtctactcaagaaactggtggtctttttagaggctgtgcaactgccaagtcagatg
tttgaattgtccaccaaggccagtgaagctgaaaaagaacagaatgaacaggtttggaag
gctttcactcatatcttggagcaggttgagactatctttggagacgaatcgctctcagtg
gacgactttttgtctatcttgcgttcgggaatgttggcctgtgattaccgtacggttcca
gccactgttgatgtggtcaatgtgaaaaaatacgacttaatacagccacattcggctccg
tatgtttttgccttggggatgacccagtcacattttcctaaggtaggacaaaataagagt
cttttgtctgatgaggagcgtagtcgtatcaatgaggcgacggatgagcacaggagattg
gatattgttacgcagatcaatagtaagcgaggtcattttgtggctatgtcgcttttcaat
gctgctagtgaacaattagtgcttagtcagccacaaattataaatgaaagtcaagatgac
atgtctgtttatttgaaggagcttcttgaccttggtattccattggtggaaaagggacgc
aatcgtttcgaagcaaagggggaccagattgggaactatagagaccttctgtcgactgtc
attgcccttaacagtagtcatttggatcttgacttggacaaagaaacccagactttctgg
tcggttgctgtacgctatctccgtaagcgacttgataaggatcaagtcttgattccaaag
gtgattgacgatgtgacgacaaccaaggtggacgatcaggtcatgcagttggtctttccg
gaggaagaaccactgaaattatcagctacagctctgacgaccttctataacaaccaatat
ctttatttcttgcgttatgttttggaacttgaggagctagagtctatccatccggatgct
cgacaccacgggacttatttacaccgagtctttgagcgtgtgatgggtgattcgtcatca
gaaagcttcgatgataaattggaaaaggccattgctcagaccaatcaggatcaacctttt
gaaattctctataccgaggaccaagagagtcgtttctctcgtcagattttggaggacatt
gcgcgttcaactgccagtgttctacgtgacaatgcggcggttaaggttgagcgtgaggaa
gtcaagtttgacttgcttttagcaaatagcatcaagattactgggattattgaccgagtg
gaccgtttaacagatggtgctctgggtgttgttgactataaaacaggtaaaaatgtcttt
gatattcagaaattctacaatggcctcagtccgcaattggtgacctatctggaggctctc
cgtcaaacctataaggttgatgctgatcaactttttggggctatgtatcttcacatgcag
gtcccacagcttaacctagctcagattggtttggaaaagctagcggctcaggctcataag
gaattgacttacaagggactttttgtgtcttcagaaacggagcatttgactggtggaaac
tatgatctgcaaaagactgtcacctatgacaaggaggatttagaaaccttgttggactac
aatattaagctctttaggagtgctgctgaagttattcgaagtgggaattttgcgatcaat
ccttatactgaggatggcaagtctgttcaaggtgatcaaatcaagtctattactcacttc
gaggccgaccgccacatgggacaggctcgtaaactcttacgtttacccaaaaagggcaag
aaggaagcctatttggagttgatggcaaaaactgaggaagagaatcagatgcaagtttct
gaaaatactatctcctttccagtcattgatcatgctgtgagagtagacaaaaaagaccag
gaggataaccatgttgactaa
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