Streptococcus thermophilus MN-ZLW-002: Y1U_C1648
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Entry
Y1U_C1648 CDS
T02116
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
stw
Streptococcus thermophilus MN-ZLW-002
Pathway
stw03030
DNA replication
stw03410
Base excision repair
stw03420
Nucleotide excision repair
stw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Y1U_C1648
03410 Base excision repair
Y1U_C1648
03420 Nucleotide excision repair
Y1U_C1648
03440 Homologous recombination
Y1U_C1648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stw03032
]
Y1U_C1648
03400 DNA repair and recombination proteins [BR:
stw03400
]
Y1U_C1648
Enzymes [BR:
stw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Y1U_C1648
DNA replication proteins [BR:
stw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Y1U_C1648
DNA repair and recombination proteins [BR:
stw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Y1U_C1648
NER (nucleotide excision repair)
GGR (global genome repair) factors
Y1U_C1648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
AFJ84097
LinkDB
All DBs
Position
complement(1609904..1612543)
Genome browser
AA seq
879 aa
AA seq
DB search
MTNQKKLLLIDGSSVAFRAFFALYNQIDRFRNNNGLHTNAIYGFHLMLDNLLERIQPTHV
LVAFDAGKTTFRTEMFADYKAGRAKTPEEFREQLPYIREMLAARGIAYYDLAQYEADDII
GTLAKMAENTSEAFQITVVSGDKDLIQLTDENTVVEISKKGVAEFEAFTPDYLMEKMGIT
PAQFVDLKALMGDKSDNIPGVTKIGEKTGLKLLLEHGSLEGIYDHIDEMKKSKMKENLIN
DKEQAFLSKTLATIDTQSPIEIGLDDTAFKGPNLEKLLAFYDEMGFVHFKNALRREAVPQ
DFDVAYVEPSQVTADHFSSEDFFYFEILGDNYHTEPIIGFAWGNEKQIYASTDTDLLKSE
AFQAALSKAVNIYDFKRSKVLLSHLGIDLPTANFDARLAKYLLSTVEDNELSTIARLYTD
LPLETDEVVYGKGAKRAIPEKEVLLSHLAKKVKVLQVAKPVMLEKLAEHGQSELLFDMEL
PLANVLAKMEMAGIKVDGQTLNEMAVENQAVIDKLTQDIYEMAGEEFNINSPKQLGVILF
EKMGLPLEYTKKTKTGYSTAVDVLERLAPIAPIVAKILEYRQITKLQSTYVLGLQDYILE
DGKIHTRYMQDLTQTGRLSSVDPNLQNIPVRLEQGRLIRKAFVPSTKDAVLLSSDYSQIE
LRVLAHISGDEHLIAAFKEGADIHTSTAMRVFGIEKPEDVTPNDRRNAKAVNFGIVYGIS
DFGLSNNLGISRKKAKEYIDTYFERYPGIKAYMDNVVREAKDKGYVSTLFHRRRELPDIN
SRNFNVRNFAERTAINSPIQGSAADILKIAMINLDKALVEGGYKTKMLLQVHDEIVLEVP
SDELLAMKALVKETMESAVELAVPLIADENEGCTWYEAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgactaatcaaaaaaaattactattaatcgacggttcgtccgttgcctttcgtgctttt
ttcgcactctataatcaaattgaccgttttcgtaacaataacggccttcataccaatgcc
atctacggctttcaccttatgttggacaacctacttgagcgtattcagccgacccatgtc
ttagtagcttttgatgcgggaaaaacaacttttcgtacagagatgtttgcggactataag
gctggtcgtgccaagactccagaggaattccgtgaacagctcccttatatccgtgagatg
ttggctgcacgtggcattgcctattatgacttggctcagtacgaagcagatgacattatc
ggtaccttagctaagatggctgaaaatactagtgaggcctttcaaattactgttgtttct
ggggataaagacttgattcagctgactgatgaaaatacagtcgttgagatttcgaagaaa
ggcgtagctgagtttgaggccttcactcctgactatctcatggagaaaatggggattact
ccagctcaattcgtcgatcttaaggccctcatgggtgacaagtccgacaatattccaggg
gttactaagataggtgaaaagactggtctcaagctcctcttggaacacggttcccttgaa
ggcatctatgaccacattgatgagatgaaaaagtccaaaatgaaggaaaatctcatcaac
gacaaggaacaagccttcctttctaagaccttggcgaccattgatacacagtcacctatt
gaaattggcctagatgatacggcctttaagggacctaaccttgaaaaattgctagccttt
tatgacgagatgggctttgttcatttcaaaaatgctcttcgcagagaggctgtcccacag
gattttgatgtggcctatgtagagcctagccaagtgacagcggatcactttagctctgaa
gatttcttctattttgaaatcctcggtgacaattatcacacagaacctatcatcggtttt
gcttggggaaatgaaaagcagatttatgcgtctacagatactgacctactcaaatcagaa
gcattccaagcagctctttctaaggctgttaatatctacgatttcaagcgcagtaaggtc
cttttgagccatctaggtattgacttgccgacagctaattttgatgcccgtttggccaag
tatttgctctcaactgttgaggacaatgaattgtcaaccattgctcgtctctacacagat
ttaccactggaaacagatgaggtggtctatggtaagggagctaagcgtgccattcctgaa
aaagaggtcttgctcagccacctggctaaaaaagtcaaggtccttcaggttgccaaaccg
gtcatgctagaaaagttagctgaacatggccaatcagagcttctctttgacatggaatta
ccattggcaaatgtgttagccaagatggaaatggctggtattaaggtcgatggacaaacc
cttaacgagatggcagtggaaaaccaagcagtcatcgacaaattgacccaagacatctac
gaaatggcgggcgaagaattcaatattaactcgcctaaacagttgggtgttatcctcttt
gaaaaaatgggtctacctttggaatacactaagaaaaccaagacaggttattcaacggca
gtggatgtccttgaacgtttggcaccaattgctccaatagtagctaagattttagagtac
cgccaaatcactaagcttcagtctacctatgtcttggggcttcaggattatatccttgag
gatggtaagatccatacccgttacatgcaagatttgacccagacaggtcgactttcatct
gtggatcctaacttgcaaaatatccccgttcgcttggagcagggtcgtctcatccgtaag
gcctttgtcccatcgactaaggacgcagtgctactaagctcggattactcacaaattgag
ttgcgcgtgcttgcccacatttcgggagatgagcatttgattgcagcctttaaggagggg
gcggatatccatacctctacagccatgcgtgtctttggtattgaaaagccagaggatgtc
acacctaacgaccgtcgtaacgctaaggctgttaacttcggtatcgtttatggtatttct
gactttggtctttctaacaaccttggtattagccgtaagaaggccaaggagtatattgac
acctattttgagcgttatcctggtattaaggcttatatggataatgtggttcgtgaagcc
aaggataaaggatatgtatcaaccctcttccaccgccgtcgtgagttgccagatatcaat
tctcgtaactttaatgtccgtaacttcgcagagcgaacagccataaactctcctatccaa
ggaagtgctgctgatatcctcaagattgctatgattaacttagacaaggctctggtagaa
ggtggctataaaaccaagatgctcctccaagtacacgatgaaatcgtccttgaggtgcca
agcgacgaacttttagctatgaaagctttggttaaagaaaccatggaatctgcagtagaa
ctcgctgtcccactcatcgcagatgaaaatgagggctgtacatggtatgaggcaaagtaa
DBGET
integrated database retrieval system
