Salmonella enterica subsp. enterica serovar Typhi CT18: HCM1.178ac
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Entry
HCM1.178ac CDS
T00064
Name
(GenBank) putative DNA-binding protein
KO
K03746
DNA-binding protein H-NS
Organism
sty
Salmonella enterica subsp. enterica serovar Typhi CT18
Brite
KEGG Orthology (KO) [BR:
sty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sty03036
]
HCM1.178ac
03400 DNA repair and recombination proteins [BR:
sty03400
]
HCM1.178ac
Chromosome and associated proteins [BR:
sty03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
HCM1.178ac
DNA repair and recombination proteins [BR:
sty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HCM1.178ac
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF5327
PaaX_C
Mannosyl_trans3
Saf4_Yju2
Motif
Other DBs
NCBI-ProteinID:
CAD09767
UniProt:
A0A718A9I8
Q935K4
LinkDB
All DBs
Position
pHCM1:complement(131457..131861)
Genome browser
AA seq
134 aa
AA seq
DB search
MSEALKSLNNIRTLRAQGRELPLEILEELLEKLSVVVEERRQEESSKEAELKARLEKIES
LRQLMLEDGIDPEELLSSFSAKSGAPKKVREPRPAKYKYTDVNGETKTWTGQGRTPKALA
EQLEAGKTLDDFLI
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagcactcaaatcattaaacaacattcgtactcttcgtgcgcagggccgtgaa
ctgccgttagagatccttgaagaactgctggaaaaattaagcgttgttgttgaagaacga
cgtcaggaagaatcttcaaaagaagctgagctgaaagcgcgtctggagaagattgaatcc
ctgcgtcaattaatgcttgaagatggaattgaccctgaagagttactgagttctttctct
gcaaagtccggagcacctaaaaaagttcgcgaaccgcgccctgcgaaatataaatacact
gatgttaatggtgaaacgaaaacctggactggccaggggcgtacccctaaagcactggcc
gaacaacttgaagccggtaaaacactggatgatttcctcatctaa
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