KEGG   Salmonella enterica subsp. enterica serovar Typhi CT18: STY0213
Entry
STY0213           CDS       T00064                                 
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
sty  Salmonella enterica subsp. enterica serovar Typhi CT18
Brite
KEGG Orthology (KO) [BR:sty00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sty03016]
    STY0213 (ligT)
Enzymes [BR:sty01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     STY0213 (ligT)
Transfer RNA biogenesis [BR:sty03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    STY0213 (ligT)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: CAD01349
UniProt: A0A715B9F8 Q8Z9C0
LinkDB
Position
complement(222159..222689)
AA seq 176 aa
MSEPKRLFFAIDLPDDARAQIIAWRAAHFASEDGRPVAAANLHLTLAFLGDVSNDKQRAL
AQLAGRIRQPGFTLHLDDAGQWLRSRVVWLGMRQPPRGLLQLANMLRAQAARSGCYQSPQ
PFHPHITLLRDASHTVAIPPPGFCWSFPVTSFALYASSYGQGRTRYAELQRWTLGE
NT seq 531 nt   +upstreamnt  +downstreamnt
atgtctgagccaaaacggctgttttttgctattgacttacccgacgacgcgcgcgcgcaa
attatcgcctggcgcgccgcccattttgcgtctgaagacggacgccccgtggcagcggcg
aacctacacctgacgctggcctttttaggcgacgtcagtaacgataagcagcgcgcgctt
gcgcaactggccggacgaattcgccaaccgggctttacgctacatctagatgacgccggt
cagtggttgcgttcgcgcgttgtgtggctgggaatgcgccagccgccgcgcgggttgttg
cagttggctaatatgctgcgcgcgcaggccgcccgcagcggttgttaccaaagcccgcag
ccttttcacccgcatattacgctgctgcgcgacgccagccatacggtggctatcccgccg
ccgggcttttgctggtcatttccggtcacatcgtttgcgctttacgcctcttcgtatggg
caaggccgtacccgctatgccgagctgcagcgctggacgctgggcgaataa

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