Salmonella enterica subsp. enterica serovar Typhi CT18: STY0878
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Entry
STY0878 CDS
T00064
Symbol
ybiS
Name
(GenBank) putative exported protein
KO
K19235
L,D-transpeptidase YbiS
Organism
sty
Salmonella enterica subsp. enterica serovar Typhi CT18
Brite
KEGG Orthology (KO) [BR:
sty00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sty01002
]
STY0878 (ybiS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sty01011
]
STY0878 (ybiS)
Peptidases and inhibitors [BR:
sty01002
]
Cysteine peptidases
Family C82
STY0878 (ybiS)
Peptidoglycan biosynthesis and degradation proteins [BR:
sty01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
STY0878 (ybiS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
Motif
Other DBs
NCBI-ProteinID:
CAD05285
UniProt:
A0A714NVE1
Q8XFD8
LinkDB
All DBs
Position
complement(868409..869329)
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AA seq
306 aa
AA seq
DB search
MNMKLTTLFAAAFAVVGFCKTASAVTYPLPTDGSRLIGQNQVITVPEGNTQPLEYFAAEY
QMGLSNMLEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIIINSAEMRLYYYPKGTNTV
IVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPM
GLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNDDIKFLFENVPVGTRVQFIDEPVKA
TTEPDGSRYIEVHNPLSTTEAQFEGKEAVPITLNKSILAVTNEPDVDQTVVQQAVQDRSG
MPVRLN
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaaattaacaacgcttttcgcggcggctttcgctgtagttggtttttgtaaa
acagcctcagcagtcacttacccgctgcctaccgatggtagccgtttaattgggcaaaat
caggtcatcaccgttccggagggcaatacccagccgctggagtattttgccgcggagtat
cagatggggctctccaacatgctggaagccaaccctggcgtggataccttcctgccgaag
ggcggtaccgtgctgaatattccgcagcagctgatcctgccggataccgtacacgaaggc
attatcatcaatagcgcggaaatgcgcctctattactacccgaaaggcacaaacaccgtt
atcgtcctgccgattgggatcggtcagttaggtaaagacacgcctatcaactggacgacc
aaagttgaacgtaaaaaagccggtccgacctggacgcctacggcaaaaatgcacgctgaa
tatcgcgccgccggcgagccgctgcctgccgtcgtgcctgcgggcccggataacccgatg
ggcctgtacgcgctgtacatcggtcgcctgtatgctattcacggcaccaacgccaacttc
ggcatcgggcttcgcgtgagccacggctgcgtacgtctgcgcaacgacgatatcaaattc
ctgtttgaaaatgtgccggtcggtacccgcgtgcagtttatcgatgaaccggtaaaagcc
accaccgagccggacggtagccgttacattgaggtgcataacccgctgtcaacgacggaa
gcgcagtttgaaggtaaggaagcggtgccgatcacgcttaataagagtatcctggccgtc
accaacgagcctgacgttgatcagaccgtcgtacaacaggcagttcaggatcgttccggg
atgccggttcgtctgaactga
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