Salmonella enterica subsp. enterica serovar Typhi CT18: STY3601
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Entry
STY3601 CDS
T00064
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sty
Salmonella enterica subsp. enterica serovar Typhi CT18
Pathway
sty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STY3601 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sty03019
]
STY3601 (recQ)
03400 DNA repair and recombination proteins [BR:
sty03400
]
STY3601 (recQ)
Enzymes [BR:
sty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STY3601 (recQ)
Messenger RNA biogenesis [BR:
sty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
STY3601 (recQ)
DNA repair and recombination proteins [BR:
sty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
STY3601 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
CAD07934
UniProt:
A0A717YRS3
Q8Z3B2
LinkDB
All DBs
Position
complement(3455088..3456917)
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVLNLESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIP
ALLLDGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQIRLLY
IAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMAL
TATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLNDAQIAL
STIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVYGMGREKSHEHWVSVIRQLIHLG
LVMQNIAQHSALQLTDAARPVLRGDVPLKLAVPRIVALKPRVMQKSFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIR
AHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtgttgaatctggaatcaggggccaaacaggttttgcaggaaacc
tttggctaccaacagtttcgcccgggccaggaagcgattattgatactgcgctctccggt
cgcgactgtctggtcgtcatgcccaccggcggcggcaaatctctgtgctatcaaatcccc
gcgttgttgctggacggattgaccgtcgtcgtttcgcccctgatctcgttgatgaaagac
caggtcgatcagctactggcgaacggggtggcggcggcctgtctgaactccactcaaagc
cgcgagcagcagcttgaggtgatggcggggtgccgtaccggacagattcgtctgctgtat
attgcgccggaacgcctgatgctggacaactttcttgatcatctggcgcactggaatccg
gtattgctggcggtggatgaagcgcactgtatctcgcaatggggacatgatttccgtccg
gaatatgcggctctcggtcagcttcgccagcgttttcccgctttgccgtttatggcattg
accgccaccgccgacgacaccacgcgccaggatattattcgtctgcttgggcttaacgat
ccgttaatccagatcagtagctttgaccgaccgaatatccgctacatgctgatggagaag
tttaagccgctcgaccagctaatgcgctatgttcaggagcaacgcggcaaatcgggtatc
atctactgcaacagtcgggcgaaagtggaagataccgccgcgcgcttgcaaagtcgcggc
attagcgcggcggcctatcatgcggggctggaaaacgctattcgcgccgatgtgcaggaa
aaatttcagcgcgacgatctgcaaatcgtggtggcgaccgtcgcttttggaatgggcata
aacaaacctaacgtacgtttcgtcgtgcatttcgatatcccgcgtaatattgaatcctac
tatcaggaaacgggccgcgccgggcgcgacggactgcctgcggaagccatgctattttac
gatccggctgatatggcctggctacgtcgttgtctggaagagaaaccagccggacagctt
caggatattgaacggcataagctgaatgcgatgggcgcttttgccgaagcgcaaacctgc
cgccgcctggtattgcttaattactttggcgaaggccgacaagaaccgtgcggcaactgc
gatatctgtctcgatccgcccaaacaatatgatggcttaaacgatgcccagattgcgctt
tctaccattggtcgggttaaccagcgttttggcatgggctacgttgtcgaggtgatccgc
ggcgcgaataaccaacgcatccgcgatttcggtcatgacaaactcaaggtttatggcatg
ggacgcgaaaagagccatgagcactgggtgagcgtgattcgccagctcattcatctgggg
ctggtaatgcaaaatattgcgcagcactccgcattacagttgacggatgccgcgcgtccg
gtactccgtggagacgttccgctaaagcttgcggtgccgcgcattgtcgccctcaaaccc
cgcgtgatgcagaaatcgttcggcggtaattacgatcgcaaattgttcgctaagttgcgc
aagctgcgtaaagctatcgctgatgaagagaatatcccgccgtatgtggtctttaacgac
gccacgttgatagaaatggcggaacagatgccggtttccgccagcgagatgttaagcgtt
aacggggttgggatgcgcaaactggagcgcttcgggaaagaattcatggcgctcatccgc
gcgcatgtcgatggtgatgacgaagagtag
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