Salmonella enterica subsp. enterica serovar Typhi CT18: STY3638
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Entry
STY3638 CDS
T00064
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
sty
Salmonella enterica subsp. enterica serovar Typhi CT18
Pathway
sty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STY3638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sty03021
]
STY3638
03019 Messenger RNA biogenesis [BR:
sty03019
]
STY3638
Transcription machinery [BR:
sty03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
STY3638
Messenger RNA biogenesis [BR:
sty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
STY3638
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
CAD09399
UniProt:
P0A296
LinkDB
All DBs
Position
complement(3494786..3496045)
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AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGESMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaagt
atggggctggaaaacctggcccgtatgcgcaagcaggacattatttttgccatcctgaag
cagcacgcaaagagtggcgaagatatctttggcgacggtgtgctggagatattgcaggat
ggatttggtttcctccgttctgcagacagctcctacctcgccggtcctgatgatatctac
gtttcccccagccaaatccgccgtttcaacctccgcactggtgataccatttctggtaag
attcgcccgccgaaagaaggtgaacgctattttgcgctgttgaaagttaacgaagttaac
tacgacaaaccggaaaacgcccgtaacaaaatcctctttgagaacttaaccccgctgcac
gcaaactctcgtctgcgtatggagcgtggtaacggttctaccgaagacttaacggcgcgc
gttctggatctggcttcgccgatcggtcgcggccagcgcggtctgattgtcgcgccgccg
aaggcgggtaaaaccatgctgctgcagaacatcgcgcagagcatcgcgtataaccaccca
gactgcgtgctgatggtgctgctgattgacgaacgtccggaagaagtaaccgagatgcag
cgtctggtgaaaggcgaagtggttgcctctacctttgacgaaccggcatcccgccacgtt
caggttgccgaaatggttatcgagaaggcgaaacgtctggttgaacacaagaaagacgtc
atcatcctgctcgactccatcacccgtctggcgcgtgcctacaacaccgtggtgccggct
tccggtaaagtactgaccggtggtgtggatgctaacgccctgcatcgtccgaagcgcttc
ttcggcgcggcgcgtaacgtggaagagggcggtagcctgactatcatcgcgacggcgcta
atcgataccggttccaagatggacgaagttatctacgaagagtttaaaggcaccggtaac
atggagctgcatctctcgcgtaagatcgctgaaaaacgtgtcttcccggctatcgactac
aaccgttccggtacccgtaaagaagagctgctcaccactcaggaagagctgcagaaaatg
tggatcctgcgtaaaatcatccatccgatgggtgagattgacgcgatggaattcctcatt
aacaaactggcgatgaccaaaactaatgacgactttttcgagatgatgaagcgctcataa
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