KEGG   Salmonella enterica subsp. enterica serovar Typhi CT18: STY3775
Entry
STY3775           CDS       T00064                                 
Name
(GenBank) primosomal protein replication factor
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
sty  Salmonella enterica subsp. enterica serovar Typhi CT18
Pathway
sty03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sty00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    STY3775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sty03400]
    STY3775
Enzymes [BR:sty01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     STY3775
DNA repair and recombination proteins [BR:sty03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     STY3775
SSDB
Motif
Pfam: PriA_3primeBD PriA-like_WH DEAD PriA_C ResIII Helicase_C Zn_ribbon_PriA AAA_30 Zn_ribbon_6 AAA_19 AAA_22 TrwB_AAD_bind IBR_1
Other DBs
NCBI-ProteinID: CAD09528
UniProt: A0A714R912 Q8Z2Z2
LinkDB
Position
3639854..3642052
AA seq 732 aa
MSVAHVALPVPLPRTFDYLLPEGGVAKAGCRVRVPFGKQQERVGIVVSVSDHSELPLDEL
KSVIEILDNEPIFSPSIWRLLLWAADYYHHPLGDVLFHALPVLLRQGKPASNAPLWYWFA
TEEGQAVDINSLKRSAKQQQALAALRQGKIWRYQVAELDFTDATLQTLRRKGLCELASET
PAFTDWREHYAVAGERLRLNTEQATAVGAIHSASDGFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNTPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVRQKKYRMLRLTRRAGNARPALQHVLDLKGQRLQAGLAPALIARMRQHLQADNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG
STHMLPVGLGTEQLEQVLAPFFPGVPISRIDRDTTSRKGALEQHLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVVLQTHH
PEHPLLQTLLYKGYDAFAEQALAERQTLQLPPWTSHVIIRAEDHNNQQAPVFLQQLRNVI
QASPLSDDKLWILGPVPALAPKRGGRYRWQILLQHPSRILLQHIISGTLALINTLPEARK
VKWVLDVDPIEG
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgtccgtcgcgcacgttgccttgcccgttccgcttccccgaacctttgattacctgctg
ccggaaggcggggtcgccaaagccgggtgccgcgtgcgcgtgccgttcggcaagcagcaa
gagcgcgtgggcattgtcgtctcggttagcgaccacagcgaattgccgctcgatgaatta
aaatcggtcattgaaatcctggataacgagccaatcttttctccctccatctggcgctta
ctcctctgggcggcggattactaccaccatcccctcggcgacgttctgtttcacgctctg
ccggttttactgcgtcagggaaaaccagccagcaacgcgcccctatggtattggttcgcc
accgaagaggggcaagccgtcgacatcaacagcctgaaacgctccgccaaacaacaacag
gcgctggcggcgctgcggcaaggaaagatctggcgctatcaggtagccgagcttgatttt
actgacgccacgctgcaaacgctgcggcgtaaggggctttgtgagcttgccagtgaaacg
cccgcgtttaccgactggcgggagcattatgccgtcgcaggagagcgcctgcggctaaat
accgaacaggcgacagcagtcggcgcaattcacagcgcgtcggacggtttctccgcctgg
ttgctggcaggcgtaaccggttccggcaagaccgaagtgtatctgagcgtgctggaaaac
gtcctcgcccagggcaaacaggcgctggtgatggtgccggaaatcggcctgacgccgcaa
acgatcgcccgttttcgcgaacgttttaacacgccggtggaagtgctgcattccgggcta
aacgacagcgagcgtctttcggcatggctgaaagcgaaaaacggcgaagcggcgattgtc
atcggcacgcgctcctcgctgtttacgccgtttaaaaatcttggcgtaattgtcatcgac
gaagagcacgacagctcttataaacagcaggaagggtggcgctaccatgcccgcgatttg
gcagtgtatcgcgcccatagcgagcagatcccgattattctcggctccgccaccccagcc
ctggaaacgctatgcaacgtgcggcagaaaaaataccggatgctgcgtctgacgcggcgc
gcaggcaacgcccgcccagccctgcagcatgtgctggatttaaaaggacagcgtcttcag
gcgggactggcgcccgcccttatcgcccgtatgcgccaacatctccaggccgataatcag
gtaattttatttcttaaccgccggggattcgcgcccgcgctgctttgccacgactgcggc
tggattgcggagtgcccgcgttgcgatcactactacacgctgcaccaggcgcagcatcat
ttacgctgccatcactgcgacagccagcgtccggtaccgcgtcagtgcccctcctgcggc
tccacacatatgctaccggttgggttagggaccgaacagctggagcaggtgctggcgccc
ttcttccccggcgtgccgatctcacgaatcgaccgtgataccaccagtcgtaaaggcgcg
ctggagcagcatctggcggaagttcaccgcggcggagcgcgcattctgataggcacacaa
atgctggcgaaaggccatcacttcccggacgtcacgctggtggcgttgctggatgtcgat
ggcgcgcttttttccgcagattttcgttcggcggaacgcttcgcccagctctacactcag
gtttccggccgcgccgggcgcgcgggtaaacagggcgaagtggtgctccaaacgcaccat
cctgagcatcccctgctgcaaacgttactgtataaaggctatgatgcgtttgcggaacag
gcgctggcggaacggcaaacgctccagcttccgccgtggaccagccacgtcattattcgc
gcagaggatcacaacaatcagcaggcgcccgtctttctccagcagttgcgtaatgtgatt
caggccagcccgctatcagacgataagctgtggatcttaggtccggttccggccctcgcg
ccaaaacgcggcggccgctatcgctggcaaattttacttcagcatccttcacggattctc
ctgcaacacatcatcagcggcacgctggcgttgatcaatacgctccctgaagcgcggaaa
gttaaatgggttctggacgtcgatccgattgaaggatag

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