Streptomyces sp. YIM 121038: C9F11_04935
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Entry
C9F11_04935 CDS
T11066
Symbol
colA
Name
(GenBank) Microbial collagenase precursor
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
styi Streptomyces sp. YIM 121038
Brite
KEGG Orthology (KO) [BR:
styi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
styi01002
]
C9F11_04935 (colA)
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
styi02042
]
C9F11_04935 (colA)
Enzymes [BR:
styi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
C9F11_04935 (colA)
Peptidases and inhibitors [BR:
styi01002
]
Metallo peptidases
Family M9
C9F11_04935 (colA)
Bacterial toxins [BR:
styi02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
C9F11_04935 (colA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
Motif
Other DBs
NCBI-ProteinID:
QCX74690
UniProt:
A0A5B7UM28
LinkDB
All DBs
Position
complement(1311573..1313897)
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AA seq
774 aa
AA seq
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MFPSRTLRRSLLTAATAVTLCVTAAPLGQADTPSAPGDAIRQAAARPGPAAPDPHDRADR
LAKAPKPGARRLPAPGGLTDGRVPGPRTPKPERRTAAAGCTLDDLTRLSPEGLADFLADP
AVTADGCLRSLIWTWDRRLAPVMSDAHVQAVSRRVSALAASHDGKNTGHLLEMFTYLHAV
AYHDFSRDEIDVTDPPTVAAMRAAVDAFGSAARTFDATGTNAETLREALYAASAPGLRQH
QLPLVKRVLKTMDADRPDTYKNRSWGGSALAALSLNYLGVYPGNRDTAFHAAVAADPAYR
AAFKAFAGYGHLKGTDNAWAARDALLEYGRMGQVEALRTEIVSGLGGLLDVTARTFGNLS
APWAKVATWLVEFEACAPYKVCREDIEKKLFPQTYSYGKQGTDGIVVRHALDRPTVDQLY
YASQQVKAQFHRVVGTQEPLKGDTNSSLRVVLYSSRAEYENFQPLLTGLSTENGGMYIEK
GATFYTYQRRVPQDSSLTLEELFRHEYTHYLNGRWAVPGSFGEGPWYQGDRTTAMDEGTA
EFFDGATRDDGIKVRKSLVKGIIADTAGGGPRMSVNQLLHATYDGDGFRFYNYAGTFFEY
LWAEHPAELQEMYRLLRKDDPTGFDAWRDRVGRDTHLQSEYDAFLDEQIAKVDDLFVPAT
TYVPVGQLRATTAAQVRDSIKATTGNAPECAAGGSQDRPRFACTGRITARLTDSQDEDLV
YKDMSETVDYFILDRAKGGENNLADMNCSFGAVDIWTDGRAGTSDFRCEGPLRG
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
gtgtttccttcgagaaccctgcgcagatccctgctcaccgccgcgacggcggtgaccctc
tgcgtgaccgcggccccgctcggccaggcggacaccccgtccgcgccgggcgacgcgata
cggcaggccgccgcgcgaccgggacccgccgcgcccgacccgcacgaccgggccgaccgc
ctcgccaaggcgcccaagcccggggcccggcggctcccggcgcccggcggcctcaccgac
ggccgtgtccccggcccccgtacgcccaagcccgagcggcggaccgcggccgccgggtgc
acgctcgacgacctgacccggctgtccccggaggggctcgccgacttcctcgccgacccg
gccgtcaccgcagacggctgtctgcgctcgctgatctggacctgggaccggcgcctcgcc
ccggtgatgtccgatgcgcacgtgcaggccgtgtcgcggcgcgtcagcgcgctcgccgcg
agccacgacggcaagaacaccggccacctccttgagatgttcacctatctgcacgccgtc
gcgtaccacgacttctcccgcgacgagatcgacgtcaccgacccgccgacggtcgccgcc
atgcgggcggccgtcgacgccttcggctcggccgcccgcaccttcgacgcgaccgggacg
aacgccgagacgctccgcgaggccctgtacgcggcgagcgcgccgggcctgcgccagcac
cagctgcccctggtcaaacgggtcctgaagaccatggacgccgaccggcccgacacctac
aagaaccgctcctggggcgggtcggccctcgccgcgctgtccctgaactacctgggcgtc
taccccggcaaccgggacaccgccttccacgcggccgtcgccgccgaccccgcctaccgc
gccgcattcaaggcgttcgcgggctacggacacctgaagggcacggacaacgcctgggcg
gcccgcgacgccctcctggagtacggccgcatgggccaggtcgaggcgctgcgcaccgag
atcgtctcggggctcggcgggctcctcgacgtcaccgcccggaccttcggcaacctcagc
gcgccgtgggcgaaggtcgccacctggctggtcgagttcgaggcctgcgccccgtacaag
gtgtgccgcgaggacatcgagaagaagctgttcccgcagacgtacagctacggcaagcag
ggcaccgacgggatcgtggtgcgccacgccctcgaccgccccaccgtcgaccagctgtac
tacgcgagccagcaggtcaaggcgcagttccaccgcgtggtcggcacccaggagccgctc
aagggcgacaccaactccagcctgcgcgtggtcctgtactcctcgcgcgccgagtacgag
aacttccagccgctcctgaccggcctgagcaccgagaacggcggcatgtacatcgagaag
ggcgccaccttctacacctaccagcgccgcgtcccgcaggactcctcgctcaccctcgag
gagctgttccggcacgagtacacgcactatctcaacggccgctgggcggtgcccggttcc
ttcggcgagggcccgtggtaccagggcgaccggaccacggcgatggacgagggcaccgcg
gagttcttcgacggcgccacccgcgacgacggcatcaaggtccgcaagtccctggtcaag
ggcatcatcgccgacaccgcgggcggcggcccgcggatgagtgtcaaccagctcctgcac
gccacctacgacggcgacggcttccggttctacaactacgcgggcacgttcttcgagtac
ctgtgggccgagcaccccgccgagctccaggagatgtaccgcctgctgcgcaaggacgac
ccgacgggcttcgacgcctggcgcgaccgggtcggcagggacacgcacctgcagtccgag
tacgacgccttcctcgacgaacagatcgccaaggtcgacgacctgttcgtgcccgccacc
acgtacgtgccggtgggccagctgcgcgccaccacggcggcccaggtccgcgactccatc
aaggcgacgaccggcaacgccccggagtgcgccgccggcggctcgcaggaccgcccgcgc
ttcgcctgcacgggacggatcacggcccgcctcaccgactcccaggacgaggacctggtc
tacaaggacatgtccgagacggtcgactacttcatcctcgaccgggccaagggcggtgag
aacaacctcgccgacatgaactgctcgttcggtgccgtggacatctggaccgacgggcgg
gccggtacctcggacttccgctgcgagggcccgctgcgcggctga
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integrated database retrieval system
