Streptomyces sp. YIM 121038: C9F11_05930
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Entry
C9F11_05930 CDS
T11066
Symbol
lpdC
Name
(GenBank) Dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
styi Streptomyces sp. YIM 121038
Pathway
styi00010
Glycolysis / Gluconeogenesis
styi00020
Citrate cycle (TCA cycle)
styi00260
Glycine, serine and threonine metabolism
styi00280
Valine, leucine and isoleucine degradation
styi00310
Lysine degradation
styi00380
Tryptophan metabolism
styi00620
Pyruvate metabolism
styi00630
Glyoxylate and dicarboxylate metabolism
styi00640
Propanoate metabolism
styi00670
One carbon pool by folate
styi00785
Lipoic acid metabolism
styi01100
Metabolic pathways
styi01110
Biosynthesis of secondary metabolites
styi01120
Microbial metabolism in diverse environments
styi01200
Carbon metabolism
styi01210
2-Oxocarboxylic acid metabolism
styi01240
Biosynthesis of cofactors
Module
styi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
styi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
styi_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
styi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
styi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
C9F11_05930 (lpdC)
00020 Citrate cycle (TCA cycle)
C9F11_05930 (lpdC)
00620 Pyruvate metabolism
C9F11_05930 (lpdC)
00630 Glyoxylate and dicarboxylate metabolism
C9F11_05930 (lpdC)
00640 Propanoate metabolism
C9F11_05930 (lpdC)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C9F11_05930 (lpdC)
00280 Valine, leucine and isoleucine degradation
C9F11_05930 (lpdC)
00310 Lysine degradation
C9F11_05930 (lpdC)
00380 Tryptophan metabolism
C9F11_05930 (lpdC)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
C9F11_05930 (lpdC)
00670 One carbon pool by folate
C9F11_05930 (lpdC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
styi04147
]
C9F11_05930 (lpdC)
Enzymes [BR:
styi01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
C9F11_05930 (lpdC)
Exosome [BR:
styi04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
C9F11_05930 (lpdC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_oxidored
FAD_binding_2
HI0933_like
FAD_binding_3
DAO
NAD_binding_8
Thi4
Lys_Orn_oxgnase
AlaDh_PNT_C
Amino_oxidase
3HCDH_N
ApbA
2-Hacid_dh_C
Ub-Mut7C
PALP
Motif
Other DBs
NCBI-ProteinID:
QCX74887
UniProt:
A0A5B7UNB5
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All DBs
Position
1573123..1574526
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AA seq
467 aa
AA seq
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MDDRFDVVVLGAGPGGYVAAIRAAQLGKRVAVVEEKYWGGVCLNVGCIPTKALLRNAELA
HLFTHEAKTYGIKVDGEVSFDYGEAFRRSRTVADGRVKGVHFLMKKNKITEFDGRGTFLD
ANTLQVAKPDGTTTTIGFDNCIIATGATPKLLPGTRRSDRVVTYEEQILADELPGSVVIA
GAGAIGIEFAYVLHNYGVKVTIVEFLDRVAPLEDADVSKELAKQYRKLGIDVLTSTRVES
IDESGPQVRVTVTAKDGKQQVLEADKVLQAIGFAPNVTGYGLEATGVALTERGAIDVDGR
CRTNVPHIYAIGDVTAKLMLAHTAESMGVVAAETIGDAETMELDYPMIPRATYSQPQIAS
FGWTEAQAKEKGFDVKVAKFPFQANGKAHGLGDTVGFVKIISDAEYGEIIGAHLIGPDVT
ELLPELTLAQQWDLTVHEVARNVHAHPTLGEAVKEAVHGLAGHMINF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccgcttcgacgtcgtcgtgctcggagcaggacccggcggttacgtggccgcc
atccgcgccgcccagctgggcaagcgggtagcggtcgtggaggagaagtactggggcggc
gtctgcctcaacgtcggctgcatcccgacgaaggccctcctgcgcaacgccgagctcgcc
cacctgttcacgcacgaggccaagacgtacggcatcaaggtcgacggcgaggtgtccttc
gactacggcgaggcgttccggcgcagccgcacggtcgcggacggccgcgtcaagggcgtc
cacttcctgatgaagaagaacaagatcacggagttcgacggccggggcaccttcctggac
gccaacaccctccaggtggccaagccggacggcaccaccaccacgatcggcttcgacaac
tgcatcatcgccaccggcgccaccccgaagctgctgcccggcacgcgccgcagcgaccgc
gtggtcacgtacgaggagcagatcctcgccgacgagctgccgggctccgtggtgatcgcg
ggcgcgggcgcgatcggcatcgagttcgcgtacgtcctgcacaactacggcgtgaaggtc
acgatcgtcgagttcctggaccgcgtcgccccgctggaggacgcggacgtctccaaggag
ctggccaagcagtaccgcaagctcggcatcgacgtgctgacctccacccgcgtggagtcc
atcgacgagtcgggcccgcaggtccgcgtgaccgtcaccgccaaggacggcaagcagcag
gtcctggaggccgacaaggtgctccaagccatcggcttcgcgccgaacgtcacgggctac
ggcctggaggcgaccggggtggcgctcaccgagcgcggcgccatcgacgtcgacggccgc
tgccgtacgaacgtgccgcacatctacgccatcggcgacgtgaccgccaagctgatgctc
gcccacaccgccgagtccatgggcgtcgtggcggccgagaccatcggggacgccgagacg
atggagctcgactacccgatgatcccgcgcgccacctactcgcagccgcagatcgcgagc
ttcggctggacggaggcgcaggccaaggagaagggcttcgacgtcaaggtcgccaagttc
ccgttccaggcgaacggcaaggcgcacggcctcggcgacaccgtcggcttcgtgaagatc
atcagcgatgccgagtacggcgagatcatcggcgcccacctcatcggcccggacgtgacg
gagctgctccccgagctgaccctggcccagcagtgggacctcacggtgcacgaggtggcc
cgcaacgtgcacgcccacccgaccctgggcgaagccgtcaaggaggccgtgcacggcctc
gccgggcacatgatcaacttctga
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